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脊椎动物转录因子 PREP、MEIS 和 PBX 的生物化学。

Biochemistry of the tale transcription factors PREP, MEIS, and PBX in vertebrates.

机构信息

Fondazione Istituto FIRC di Oncologia Molecolare (IFOM), Milano, Italy.

出版信息

Dev Dyn. 2014 Jan;243(1):59-75. doi: 10.1002/dvdy.24016. Epub 2013 Sep 2.

DOI:10.1002/dvdy.24016
PMID:23873833
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4232920/
Abstract

TALE (three amino acids loop extension) homeodomain transcription factors are required in various steps of embryo development, in many adult physiological functions, and are involved in important pathologies. This review focuses on the PREP, MEIS, and PBX sub-families of TALE factors and aims at giving information on their biochemical properties, i.e., structure, interactors, and interaction surfaces. Members of the three sets of protein form dimers in which the common partner is PBX but they can also directly interact with other proteins forming higher-order complexes, in particular HOX. Finally, recent advances in determining the genome-wide DNA-binding sites of PREP1, MEIS1, and PBX1, and their partial correspondence with the binding sites of some HOX proteins, are reviewed. These studies have generated a few general rules that can be applied to all members of the three gene families. PREP and MEIS recognize slightly different consensus sequences: PREP prefers to bind to promoters and to have PBX as a DNA-binding partner; MEIS prefers HOX as partner, and both PREP and MEIS drive PBX to their own binding sites. This outlines the clear individuality of the PREP and MEIS proteins, the former mostly devoted to basic cellular functions, the latter more to developmental functions.

摘要

TALE(三个氨基酸环延伸)同源域转录因子在胚胎发育的各个步骤、许多成年生理功能中都需要,并参与重要的病理过程。本综述重点介绍 TALE 因子的 PREP、MEIS 和 PBX 亚家族,并旨在提供有关其生化特性的信息,即结构、相互作用体和相互作用表面。这三组蛋白的成员形成二聚体,其中常见的伴侣是 PBX,但它们也可以直接与其他形成更高阶复合物的蛋白质相互作用,特别是 HOX。最后,还回顾了确定 PREP1、MEIS1 和 PBX1 的全基因组 DNA 结合位点及其与一些 HOX 蛋白结合位点的部分对应关系的最新进展。这些研究产生了一些可以应用于这三个基因家族所有成员的一般规则。PREP 和 MEIS 识别略有不同的共有序列:PREP 更喜欢结合启动子,并与 PBX 作为 DNA 结合伴侣;MEIS 更喜欢作为伴侣的 HOX,PREP 和 MEIS 都驱使 PBX 结合到它们自己的结合位点。这概述了 PREP 和 MEIS 蛋白的明显个体性,前者主要致力于基本的细胞功能,后者更多地用于发育功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/6d375ff9efbf/dvdy0243-0059-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/0693270e925d/dvdy0243-0059-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/7d62d55adb55/dvdy0243-0059-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/8129a063ae81/dvdy0243-0059-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/6d375ff9efbf/dvdy0243-0059-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/0693270e925d/dvdy0243-0059-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/7d62d55adb55/dvdy0243-0059-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/8129a063ae81/dvdy0243-0059-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ea4/4232920/6d375ff9efbf/dvdy0243-0059-f4.jpg

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