Suppr超能文献

通过表达转座子编码的反沉默因子来动员植物转座子。

Mobilization of a plant transposon by expression of the transposon-encoded anti-silencing factor.

机构信息

Department of Integrated Genetics, National Institute of Genetics, Shizuoka, Japan.

出版信息

EMBO J. 2013 Aug 28;32(17):2407-17. doi: 10.1038/emboj.2013.169. Epub 2013 Jul 30.

Abstract

Transposable elements (TEs) have a major impact on genome evolution, but they are potentially deleterious, and most of them are silenced by epigenetic mechanisms, such as DNA methylation. Here, we report the characterization of a TE encoding an activity to counteract epigenetic silencing by the host. In Arabidopsis thaliana, we identified a mobile copy of the Mutator-like element (MULE) with degenerated terminal inverted repeats (TIRs). This TE, named Hiun (Hi), is silent in wild-type plants, but it transposes when DNA methylation is abolished. When a Hi transgene was introduced into the wild-type background, it induced excision of the endogenous Hi copy, suggesting that Hi is the autonomously mobile copy. In addition, the transgene induced loss of DNA methylation and transcriptional activation of the endogenous Hi. Most importantly, the trans-activation of Hi depends on a Hi-encoded protein different from the conserved transposase. Proteins related to this anti-silencing factor, which we named VANC, are widespread in the non-TIR MULEs and may have contributed to the recent success of these TEs in natural Arabidopsis populations.

摘要

转座元件 (TEs) 对基因组进化有重大影响,但它们可能是有害的,大多数转座元件通过表观遗传机制(如 DNA 甲基化)被沉默。在这里,我们报告了一种编码活性物质的 TE 的特征,该活性物质可拮抗宿主的表观遗传沉默。在拟南芥中,我们鉴定了一个 Mutator-like 元件 (MULE) 的移动拷贝,其末端反向重复序列 (TIRs) 退化。这个 TE 被命名为 Hiun (Hi),在野生型植物中是沉默的,但当 DNA 甲基化被消除时,它会转座。当一个 Hi 转基因被引入野生型背景时,它诱导内源性 Hi 拷贝的切除,这表明 Hi 是自主移动的拷贝。此外,转基因诱导内源 Hi 的去甲基化和转录激活。最重要的是,Hi 的转激活依赖于一种不同于保守转座酶的 Hi 编码蛋白。我们称之为 VANC 的这种抗沉默因子的相关蛋白广泛存在于非 TIR MULE 中,可能有助于这些 TEs 在自然拟南芥群体中的近期成功。

相似文献

10
Bursts of retrotransposition reproduced in Arabidopsis.逆转座爆发在拟南芥中得以重现。
Nature. 2009 Sep 17;461(7262):423-6. doi: 10.1038/nature08351. Epub 2009 Sep 6.

引用本文的文献

本文引用的文献

5
Phytozome: a comparative platform for green plant genomics.植物生物学数据库:一个用于绿色植物基因组学的比较平台。
Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86. doi: 10.1093/nar/gkr944. Epub 2011 Nov 22.
7
CDD: a Conserved Domain Database for the functional annotation of proteins.CDD:一个用于蛋白质功能注释的保守结构域数据库。
Nucleic Acids Res. 2011 Jan;39(Database issue):D225-9. doi: 10.1093/nar/gkq1189. Epub 2010 Nov 24.
9
Differentiation of epigenetic modifications between transposons and genes.转座子与基因之间的表观遗传修饰的分化。
Curr Opin Plant Biol. 2011 Feb;14(1):81-7. doi: 10.1016/j.pbi.2010.08.017. Epub 2010 Sep 23.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验