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爪哇肥鼻虾虎鱼(硬骨鱼纲,虾虎鱼科)的线粒体全基因组

The complete mitochondrial genome of the Java fat-nose goby Pseudogobius javanicus (Teleostei, Gobiidae).

作者信息

Huang Shih-Pin, Shen Chia-Ning, Chen I-Shiung

机构信息

Institute of Marine Biology, National Taiwan Ocean University , Keelung, Taiwan , ROC and.

出版信息

Mitochondrial DNA. 2015 Feb;26(1):159-61. doi: 10.3109/19401736.2013.819502. Epub 2013 Jul 31.

DOI:10.3109/19401736.2013.819502
PMID:23901921
Abstract

In this study, the complete mitochondrial genome of the fat-nose goby Pseudogobius javanicus has been amplified. P. javanicus is widely contributed species in Southeast to East Asia. The complete mitochondrial genome is 16,493 base pairs (bp) in total length, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 2 rRNAs, 22 tRNAs, 1 control region (CR) and 1 light-strand replication origin (OL). The overall base composition of P. javanicus is 27.1% for A, 27.3% for T, 28.6% for C, 17.0% for G, with higher AT content of 54.4%. This study will contribute for understanding the phylogenetic approach in genus Pseudogobius.

摘要

在本研究中,已扩增出肥鼻虾虎鱼(Pseudogobius javanicus)的完整线粒体基因组。肥鼻虾虎鱼是东南亚至东亚广泛分布的物种。完整的线粒体基因组全长16,493个碱基对(bp),具有典型的脊椎动物线粒体基因排列,包括13个蛋白质编码基因、2个rRNA、22个tRNA、1个控制区(CR)和1个轻链复制起点(OL)。肥鼻虾虎鱼的总体碱基组成为:A占27.1%,T占27.3%,C占28.6%,G占17.0%,AT含量较高,为54.4%。本研究将有助于了解虾虎鱼属的系统发育方法。

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