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霍氏鲻虾虎鱼(Hemigobius hoevenii (Bleeker))(硬骨鱼纲,虾虎鱼科)的线粒体全基因组

The complete mitochondrial genome of Hoeven's mullet-goby Hemigobius hoevenii (Bleeker) (Teleostei, Gobiidae).

作者信息

Huang Shih-Pin, Shen Chia-Ning, Chen I-Shiung

机构信息

a Institute of Marine Biology, National Taiwan Ocean University , Keelung , Taiwan , ROC and.

b Genomic Research Center, Academia Sinica , Taipei , Taiwan , ROC.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):715-6. doi: 10.3109/19401736.2014.913156. Epub 2014 Apr 29.

Abstract

In this study, the complete mitochondrial genome of Hoeven's mullet-goby Hemigobius hoevenii (Bleeker, 1851) collected from Malay Peninsula has been amplified and sequenced. The complete mitochondrial genome is 16,469 base pairs (bp) in total length, had the typical vertebrate mitochondrial gene arrangement, including 13 protein-coding genes, 2 rRNAs, 22 tRNAs, 1 control region (CR) and 1 light-strand replication origin (OL). The overall base composition of H. hoevenii is 27.1% for A, 26.6% for T, 29.0% for C, 17.3% for G, with higher AT content 53.7%. This study will contribute for understanding the phylogenetic approach of Hemigobius species as well as the related genera of gobiid fishes.

摘要

在本研究中,对采集自马来半岛的霍氏髭鲷(Hemigobius hoevenii, Bleeker,1851)的完整线粒体基因组进行了扩增和测序。完整的线粒体基因组全长16,469个碱基对(bp),具有典型的脊椎动物线粒体基因排列,包括13个蛋白质编码基因、2个rRNA、22个tRNA、1个控制区(CR)和1个轻链复制起点(OL)。霍氏髭鲷的总体碱基组成为:A占27.1%,T占26.6%,C占29.0%,G占17.3%,AT含量较高,为53.7%。本研究将有助于理解髭鲷属物种以及虾虎鱼科相关属的系统发育关系。

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