• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

北极冰川表面 T4 型噬菌体的多样性及其潜在起源。

High diversity and potential origins of T4-type bacteriophages on the surface of Arctic glaciers.

机构信息

Bristol Glaciology Centre, School of Geographical Sciences, University of Bristol, BS8 1SS, Bristol, UK.

出版信息

Extremophiles. 2013 Sep;17(5):861-70. doi: 10.1007/s00792-013-0569-x. Epub 2013 Aug 2.

DOI:10.1007/s00792-013-0569-x
PMID:23907516
Abstract

Tailed bacteriophages are the most abundant viruses in the biosphere. Here we examined the T4-type bacteriophage community inhabiting the surface of two glaciers in Svalbard. We used a molecular approach to target g23, the major capsid protein gene, to demonstrate that in the extreme cryoconite hole habitats the T4-type phages are surprisingly diverse. Phylogenetic analysis revealed that cryoconite hole sediments harbour a mixed phage community spanning multiple T4-type phage subgroups. The majority (71 %) of phage sequences clustered into three novel phylogenetically distinct groups, whilst the remainder clustered with known marine and soil derived phage sequences. The meltwater in cryoconite holes also contained a further distinct phage community which was related to previously detected marine phage variants. The ability of phages to move between marine and glacial habitats was tested in a transplantation experiment. Phages from the nearby marine fjord were found to be capable of initiating infection of supraglacial bacteria, suggesting suitable hosts could be found by non-native phages. Together this evidence suggests that the surface of glaciers contain both novel and cosmopolitan phages, some of which may have arrived in the cryosphere from other biomes.

摘要

有尾噬菌体是生物圈中最丰富的病毒。在这里,我们研究了栖息在斯瓦尔巴群岛两个冰川表面的 T4 型噬菌体群落。我们使用一种针对 g23(主要衣壳蛋白基因)的分子方法,证明在极端的冰核洞生境中,T4 型噬菌体的多样性令人惊讶。系统发育分析表明,冰核洞沉积物中含有混合的噬菌体群落,跨越多个 T4 型噬菌体亚群。大多数(71%)噬菌体序列聚类为三个新的在系统发育上截然不同的组,而其余的则与已知的海洋和土壤来源的噬菌体序列聚类。冰核洞中的融水还含有另一个独特的噬菌体群落,与之前检测到的海洋噬菌体变体有关。在一项移植实验中测试了噬菌体在海洋和冰川生境之间移动的能力。来自附近海洋峡湾的噬菌体被发现能够引发上覆细菌的感染,这表明非本地噬菌体可以找到合适的宿主。这些证据表明,冰川表面既包含新的也包含世界性的噬菌体,其中一些可能是从其他生物群系到达冰冻圈的。

相似文献

1
High diversity and potential origins of T4-type bacteriophages on the surface of Arctic glaciers.北极冰川表面 T4 型噬菌体的多样性及其潜在起源。
Extremophiles. 2013 Sep;17(5):861-70. doi: 10.1007/s00792-013-0569-x. Epub 2013 Aug 2.
2
Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere.海洋T4型噬菌体,是生物圈暗物质中普遍存在的一个组成部分。
Proc Natl Acad Sci U S A. 2005 Aug 30;102(35):12471-6. doi: 10.1073/pnas.0503404102. Epub 2005 Aug 22.
3
Molecular characterization of T4-type bacteriophages in a rice field.稻田中T4型噬菌体的分子特征
Environ Microbiol. 2007 Apr;9(4):1091-6. doi: 10.1111/j.1462-2920.2006.01207.x.
4
Characterization of the major capsid genes (g23) of T4-type bacteriophages in the wetlands of northeast China.中国东北地区湿地中 T4 型噬菌体主要衣壳基因(g23)的特征。
Microb Ecol. 2013 Apr;65(3):616-25. doi: 10.1007/s00248-012-0158-z. Epub 2013 Jan 11.
5
[Genetic diversity of major capsid genes (g23) of T4-type bacteriophages in natural environments--a review].[自然环境中T4型噬菌体主要衣壳基因(g23)的遗传多样性——综述]
Wei Sheng Wu Xue Bao. 2011 Jun;51(6):732-9.
6
Microbial community development on the surface of Hans and Werenskiold Glaciers (Svalbard, Arctic): a comparison.汉斯冰川和韦伦斯基奥德冰川(北极斯瓦尔巴群岛)表面微生物群落的发展:一项比较研究。
Extremophiles. 2015 Sep;19(5):885-97. doi: 10.1007/s00792-015-0764-z. Epub 2015 Jun 24.
7
The diversity and evolution of the T4-type bacteriophages.T4型噬菌体的多样性与进化
Res Microbiol. 2003 May;154(4):259-67. doi: 10.1016/S0923-2508(03)00069-X.
8
Coupled cryoconite ecosystem structure-function relationships are revealed by comparing bacterial communities in alpine and Arctic glaciers.高寒冰川和北极冰川中细菌群落的比较揭示了耦合的冰核生物群落结构与功能关系。
FEMS Microbiol Ecol. 2014 Aug;89(2):222-37. doi: 10.1111/1574-6941.12283. Epub 2014 Feb 5.
9
The capsid of the T4 phage superfamily: the evolution, diversity, and structure of some of the most prevalent proteins in the biosphere.T4噬菌体超家族的衣壳:生物圈中一些最普遍蛋白质的进化、多样性和结构
Mol Biol Evol. 2008 Jul;25(7):1321-32. doi: 10.1093/molbev/msn080. Epub 2008 Apr 7.
10
Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic.北极和南极冰川冰核洞中细菌、真核生物和古菌群落的结构和多样性。
FEMS Microbiol Ecol. 2012 Nov;82(2):254-67. doi: 10.1111/j.1574-6941.2011.01277.x. Epub 2012 Jan 11.

引用本文的文献

1
Giant viral signatures on the Greenland ice sheet.格陵兰冰盖上的巨型病毒特征。
Microbiome. 2024 May 17;12(1):91. doi: 10.1186/s40168-024-01796-y.
2
Breaking the Ice: A Review of Phages in Polar Ecosystems.破冰之旅:极地生态系统中的噬菌体综述
Methods Mol Biol. 2024;2738:31-71. doi: 10.1007/978-1-0716-3549-0_3.
3
The Beauty of Bacteriophage T4 Research: Lindsay W. Black and the T4 Head Assembly.噬菌体 T4 研究之美:林赛·W·布莱克与 T4 头部组装。

本文引用的文献

1
Frequent freeze-thaw cycles yield diminished yet resistant and responsive microbial communities in two temperate soils: a laboratory experiment.频繁的冻融循环会导致两种温带土壤中微生物群落的减少,但具有抗性和响应性:一项实验室实验。
FEMS Microbiol Ecol. 2010 Nov;74(2):323-35. doi: 10.1111/j.1574-6941.2010.00951.x. Epub 2010 Aug 23.
2
Possible interactions between bacterial diversity, microbial activity and supraglacial hydrology of cryoconite holes in Svalbard.斯瓦尔巴德地区冰核洞细菌多样性、微生物活性和融雪水文之间可能存在的相互作用。
ISME J. 2011 Jan;5(1):150-60. doi: 10.1038/ismej.2010.100. Epub 2010 Jul 22.
3
Phylogenetic diversity of T4-like bacteriophages in Lake Baikal, East Siberia.
Viruses. 2022 Mar 28;14(4):700. doi: 10.3390/v14040700.
4
An Appraisal of Bacteriophage Isolation Techniques from Environment.环境中噬菌体分离技术的评估
Microb Ecol. 2022 Apr;83(3):519-535. doi: 10.1007/s00248-021-01782-z. Epub 2021 Jun 17.
5
Influence of Non-canonical DNA Bases on the Genomic Diversity of .非经典DNA碱基对……基因组多样性的影响
Front Microbiol. 2021 Apr 6;12:632686. doi: 10.3389/fmicb.2021.632686. eCollection 2021.
6
Role of Phylogenetic Structure in the Dynamics of Coastal Viral Assemblages.系统发育结构在沿海病毒组合体动态中的作用。
Appl Environ Microbiol. 2021 May 11;87(11). doi: 10.1128/AEM.02704-20.
7
T4-like myovirus community shaped by dispersal and deterministic processes in the South China Sea.南海离散和确定性过程塑造的 T4 样肌尾病毒群落。
Environ Microbiol. 2021 Feb;23(2):1038-1052. doi: 10.1111/1462-2920.15290. Epub 2020 Nov 3.
8
Phylogenetic Diversity of T4-Type Phages in Sediments from the Subtropical Pearl River Estuary.亚热带珠江口沉积物中T4型噬菌体的系统发育多样性
Front Microbiol. 2017 May 18;8:897. doi: 10.3389/fmicb.2017.00897. eCollection 2017.
9
Analysis of virus genomes from glacial environments reveals novel virus groups with unusual host interactions.对来自冰川环境的病毒基因组进行分析,发现了具有不同寻常宿主相互作用的新型病毒群。
Front Microbiol. 2015 Jul 3;6:656. doi: 10.3389/fmicb.2015.00656. eCollection 2015.
10
Using signature genes as tools to assess environmental viral ecology and diversity.利用特征基因作为工具评估环境病毒生态学及多样性。
Appl Environ Microbiol. 2014 Aug;80(15):4470-80. doi: 10.1128/AEM.00878-14.
贝加尔湖,东西伯利亚,T4 样噬菌体的系统发育多样性。
FEMS Microbiol Lett. 2010 Aug 1;309(2):122-9. doi: 10.1111/j.1574-6968.2010.02025.x. Epub 2010 May 28.
4
Glaciers as a source of ancient and labile organic matter to the marine environment.冰川是海洋环境中古老而不稳定的有机物质的来源。
Nature. 2009 Dec 24;462(7276):1044-7. doi: 10.1038/nature08580.
5
High diversity of the viral community from an Antarctic lake.来自南极湖泊的病毒群落具有高度多样性。
Science. 2009 Nov 6;326(5954):858-61. doi: 10.1126/science.1179287.
6
Global distribution of cyanobacterial ecotypes in the cold biosphere.全球冷生环境中蓝藻的生态型分布。
ISME J. 2010 Feb;4(2):191-202. doi: 10.1038/ismej.2009.113. Epub 2009 Nov 5.
7
Jalview Version 2--a multiple sequence alignment editor and analysis workbench.Jalview 2版本——一个多序列比对编辑器和分析工作台。
Bioinformatics. 2009 May 1;25(9):1189-91. doi: 10.1093/bioinformatics/btp033. Epub 2009 Jan 16.
8
Microbial primary production on an Arctic glacier is insignificant in comparison with allochthonous organic carbon input.与外源有机碳输入相比,北极冰川上的微生物初级生产微不足道。
Environ Microbiol. 2008 Aug;10(8):2172-8. doi: 10.1111/j.1462-2920.2008.01620.x. Epub 2008 Apr 21.
9
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.MEGA4:分子进化遗传学分析(MEGA)软件版本4.0。
Mol Biol Evol. 2007 Aug;24(8):1596-9. doi: 10.1093/molbev/msm092. Epub 2007 May 7.
10
Molecular characterization of T4-type bacteriophages in a rice field.稻田中T4型噬菌体的分子特征
Environ Microbiol. 2007 Apr;9(4):1091-6. doi: 10.1111/j.1462-2920.2006.01207.x.