Tsai Hui-Hsu Gavin, Juang Wei-Fu, Chang Che-Ming, Hou Tsai-Yi, Lee Jian-Bin
Department of Chemistry, National Central University, Jhong-Li City, Tao-Yuan County 32001, Taiwan.
Biochim Biophys Acta. 2013 Nov;1828(11):2729-38. doi: 10.1016/j.bbamem.2013.07.022. Epub 2013 Aug 2.
Although membrane fusion plays key roles in intracellular trafficking, neurotransmitter release, and viral infection, its underlying molecular mechanism and its energy landscape are not well understood. In this study, we employed all-atom molecular dynamics simulations to investigate the fusion mechanism, catalyzed by Ca(2+) ions, of two highly hydrated 1-palmitoyl-2-oleoyl-sn-3-phosphoethanolamine (POPE) micelles. This simulation system mimics the small contact zone between two large vesicles at which the fusion is initiated. Our simulations revealed that Ca(2+) ions are capable of catalyzing the fusion of POPE micelles; in contrast, we did not observe close contact of the two micelles in the presence of only Na(+) or Mg(2+) ions. Determining the free energy landscape of fusion allowed us to characterize the underlying molecular mechanism. The Ca(2+) ions play a key role in catalyzing the micelle fusion in three aspects: creating a more-hydrophobic surface on the micelles, binding two micelles together, and enhancing the formation of the pre-stalk state. In contrast, Na(+) or Mg(2+) ions have relatively limited effects. Effective fusion proceeds through sequential formation of pre-stalk, stalk, hemifused-like, and fused states. The pre-stalk state is the state featuring lipid tails exposed to the inter-micellar space; its formation is the rate-limiting step. The stalk state is the state where a localized hydrophobic core is formed connecting two micelles; its formation occurs in conjunction with water expulsion from the inter-micellar space. This study provides insight into the molecular mechanism of fusion from the points of view of energetics, structure, and dynamics.
尽管膜融合在细胞内运输、神经递质释放和病毒感染中起着关键作用,但其潜在的分子机制及其能量态势仍未得到充分理解。在本研究中,我们采用全原子分子动力学模拟来研究由钙离子催化的两个高度水合的1-棕榈酰-2-油酰-sn-3-磷酸乙醇胺(POPE)胶束的融合机制。该模拟系统模拟了两个大囊泡之间开始融合的小接触区域。我们的模拟表明,钙离子能够催化POPE胶束的融合;相比之下,在仅存在钠离子或镁离子的情况下,我们未观察到两个胶束的紧密接触。确定融合的自由能态势使我们能够表征潜在的分子机制。钙离子在催化胶束融合中在三个方面起关键作用:在胶束上形成更疏水的表面、将两个胶束结合在一起以及增强前茎状态的形成。相比之下,钠离子或镁离子的作用相对有限。有效的融合通过前茎、茎、半融合样和融合状态的顺序形成进行。前茎状态是脂质尾部暴露于胶束间空间的状态;其形成是限速步骤。茎状态是形成连接两个胶束的局部疏水核心的状态;其形成与胶束间空间中的水排出同时发生。本研究从能量学、结构和动力学的角度深入了解了融合的分子机制。