Institute of Bioinformatics, International Technology Park, Bangalore 560 066, India.
Department of Biotechnology, Kuvempu University, Shankaraghatta, Shimoga 577 451, Karnataka, India.
Clin Proteomics. 2013 Aug 1;10(1):9. doi: 10.1186/1559-0275-10-9.
The ciliary body is the circumferential muscular tissue located just behind the iris in the anterior chamber of the eye. It plays a pivotal role in the production of aqueous humor, maintenance of the lens zonules and accommodation by changing the shape of the crystalline lens. The ciliary body is the major target of drugs against glaucoma as its inhibition leads to a drop in intraocular pressure. A molecular study of the ciliary body could provide a better understanding about the pathophysiological processes that occur in glaucoma. Thus far, no large-scale proteomic investigation has been reported for the human ciliary body.
In this study, we have carried out an in-depth LC-MS/MS-based proteomic analysis of normal human ciliary body and have identified 2,815 proteins. We identified a number of proteins that were previously not described in the ciliary body including importin 5 (IPO5), atlastin-2 (ATL2), B-cell receptor associated protein 29 (BCAP29), basigin (BSG), calpain-1 (CAPN1), copine 6 (CPNE6), fibulin 1 (FBLN1) and galectin 1 (LGALS1). We compared the plasma proteome with the ciliary body proteome and found that the large majority of proteins in the ciliary body were also detectable in the plasma while 896 proteins were unique to the ciliary body. We also classified proteins using pathway enrichment analysis and found most of proteins associated with ubiquitin pathway, EIF2 signaling, glycolysis and gluconeogenesis.
More than 95% of the identified proteins have not been previously described in the ciliary body proteome. This is the largest catalogue of proteins reported thus far in the ciliary body that should provide new insights into our understanding of the factors involved in maintaining the secretion of aqueous humor. The identification of these proteins will aid in understanding various eye diseases of the anterior segment such as glaucoma and presbyopia.
睫状体是位于眼前房虹膜后面的环形肌肉组织。它在房水的产生、晶状体悬韧带的维持和通过改变晶状体形状实现调节方面发挥着关键作用。睫状体是治疗青光眼药物的主要靶点,因为抑制睫状体可导致眼内压下降。对睫状体的分子研究可以更好地了解青光眼发生的病理生理过程。到目前为止,还没有关于人睫状体的大规模蛋白质组学研究报告。
在这项研究中,我们对正常人类睫状体进行了深入的基于 LC-MS/MS 的蛋白质组学分析,共鉴定到 2815 种蛋白质。我们鉴定了一些以前未在睫状体中描述过的蛋白质,包括输入蛋白 5(IPO5)、大环蛋白 2(ATL2)、B 细胞受体相关蛋白 29(BCAP29)、basigin(BSG)、钙蛋白酶 1(CAPN1)、衔接蛋白 6(CPNE6)、纤维蛋白 1(FBLN1)和半乳糖凝集素 1(LGALS1)。我们将血浆蛋白质组与睫状体蛋白质组进行了比较,发现睫状体中的绝大多数蛋白质也可在血浆中检测到,而 896 种蛋白质是睫状体特有的。我们还通过途径富集分析对蛋白质进行了分类,发现大多数与泛素途径、EIF2 信号、糖酵解和糖异生相关的蛋白质。
超过 95%的鉴定蛋白以前没有在睫状体蛋白质组中描述过。这是迄今为止在睫状体中报道的最大蛋白质组目录,应该为我们理解维持房水分泌所涉及的因素提供新的见解。这些蛋白质的鉴定将有助于了解前部眼部疾病,如青光眼和老花眼。