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盘基网柄菌基因组学:其发展历程及我们从中所学到的知识。

Dictyostelium genomics: how it developed and what we have learned from it.

作者信息

Noegel A A, Glöckner G

机构信息

Institute of Biochemistry I, Medical Faculty, Center for Molecular Medicine Cologne, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases, University of Cologne, Germany.

出版信息

Pharmazie. 2013 Jul;68(7):474-7.

Abstract

Dictyostelium discoideum is the most prominent member of the social amoebae. It has been used as an experimental system since more than 50 years and a large number of scientists worldwide work on different aspects such as chemotaxis, cytoskeleton, differentiation and development. Dictyostelium shares more features with animals than fungi although it diverged much earlier in evolution. Many of the results obtained with D. discoideum can therefore be transferred to animals making D. discoideum a valuable model organism. Targeted gene inactivation using homologous recombination is easy and mutant phenotypes can be readily isolated due to the haploid nature of its genome. Furthermore, a variety of techniques and tools are available that facilitate the experimental work; its genome and that of several Dictyostelidae has been sequenced and most recently a high-resolution genome wide nucleosome map for D. discoideum has been generated.

摘要

盘基网柄菌是社会性变形虫中最著名的成员。50多年来,它一直被用作实验系统,世界各地的大量科学家致力于研究趋化性、细胞骨架、分化和发育等不同方面。尽管盘基网柄菌在进化上分歧更早,但它与动物的共同特征比与真菌的更多。因此,用盘基网柄菌获得的许多结果可以应用于动物,这使得盘基网柄菌成为一种有价值的模式生物。由于其基因组的单倍体性质,利用同源重组进行靶向基因失活很容易,并且可以很容易地分离出突变表型。此外,有多种技术和工具可用于促进实验工作;它的基因组以及几种盘基网柄菌科的基因组已经测序,最近还生成了盘基网柄菌的高分辨率全基因组核小体图谱。

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