Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, 400085, India.
Photosynth Res. 2013 Nov;118(1-2):147-54. doi: 10.1007/s11120-013-9904-4. Epub 2013 Aug 9.
Single-stranded (ss) DNA-binding (Ssb) proteins are vital for all DNA metabolic processes and are characterized by an N-terminal OB-fold followed by P/G-rich spacer region and a C-terminal tail. In the genome of the heterocystous, nitrogen-fixing cyanobacterium, Anabaena sp. strain PCC 7120, two genes alr0088 and alr7579 are annotated as ssb, but the corresponding proteins have only the N-terminal OB-fold and no P/G-rich region or acidic tail, thereby rendering them unable to interact with genome maintenance proteins. Both the proteins were expressed under normal growth conditions in Anabaena PCC7120 and regulated differentially under abiotic stresses which induce DNA damage, indicating that these are functional genes. Constitutive overexpression of Alr0088 in Anabaena enhanced the tolerance to DNA-damaging stresses which caused formation of DNA adducts such as UV and MitomycinC, but significantly decreased the tolerance to γ-irradiation, which causes single- and double-stranded DNA breaks. On the other hand, overexpression of Alr7579 had no significant effect on normal growth or stress tolerance of Anabaena. Thus, of the two truncated Ssb-like proteins, Alr0088 may be involved in protection of ssDNA from damage, but due to the absence of acidic tail, it may not aid in repair of damaged DNA. These two proteins are present across cyanobacterial genera and unique to them. These initial studies pave the way to the understanding of DNA repair in cyanobacteria, which is not very well documented.
单链 DNA 结合(Ssb)蛋白对于所有 DNA 代谢过程都是至关重要的,其特征是 N 端 OB 折叠,其后是富含 P/G 的间隔区和 C 端尾部。在固氮蓝藻鱼腥藻 PCC 7120 的基因组中,两个基因 alr0088 和 alr7579 被注释为 ssb,但相应的蛋白质只有 N 端 OB 折叠,没有 P/G 富含区或酸性尾部,因此无法与基因组维持蛋白相互作用。这两种蛋白在鱼腥藻 PCC7120 的正常生长条件下均有表达,并在诱导 DNA 损伤的非生物胁迫下差异调节,表明它们是功能性基因。在鱼腥藻中组成型过表达 Alr0088 增强了对 DNA 损伤应激的耐受性,导致 DNA 加合物如 UV 和丝裂霉素 C 的形成,但对引起单链和双链 DNA 断裂的 γ 辐射的耐受性显著降低。另一方面,Alr7579 的过表达对鱼腥藻的正常生长或胁迫耐受性没有显著影响。因此,在这两种截短的 Ssb 样蛋白中,Alr0088 可能参与保护 ssDNA 免受损伤,但由于缺乏酸性尾部,它可能无助于修复受损的 DNA。这两种蛋白存在于蓝细菌属中,是它们所特有的。这些初步研究为理解蓝细菌中的 DNA 修复铺平了道路,而蓝细菌中的 DNA 修复尚未得到很好的记录。