来自美国的猪流行性腹泻病毒毒株USA/Colorado/2013的全基因组序列
Complete Genome Sequence of Porcine Epidemic Diarrhea Virus Strain USA/Colorado/2013 from the United States.
作者信息
Marthaler Douglas, Jiang Yin, Otterson Tracy, Goyal Sagar, Rossow Kurt, Collins James
机构信息
University of Minnesota Veterinary Diagnostic Laboratory, Saint Paul, Minnesota, USA.
出版信息
Genome Announc. 2013 Aug 8;1(4):e00555-13. doi: 10.1128/genomeA.00555-13.
Abstract
Porcine epidemic diarrhea virus (PEDV) is newly emerging in the United States. PEDV strain USA/Colorado/2013 (CO/13) was obtained from a 7-day-old piglet with severe diarrhea, and the complete genome was sequenced to further study the PEDV outbreak in the United States.
摘要
猪流行性腹泻病毒（PEDV）最近在美国出现。PEDV毒株美国/科罗拉多/2013（CO/13）是从一头患有严重腹泻的7日龄仔猪身上获得的，对其全基因组进行了测序，以进一步研究美国的PEDV疫情。
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3
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