Bohdan Khmelnytsky National University, 18031, Cherkassy, Ukraine,
J Mol Model. 2013 Oct;19(10):4511-9. doi: 10.1007/s00894-013-1962-1. Epub 2013 Aug 14.
The single crystal architecture of the high-symmetry octathio[8]circulene and sym-tetraselenatetrathio[8]circulene is studied at the density functional theory (DFT) level with the quantum theory of atoms in molecules (QTAIMs) approach to the electron density distribution analysis. The presence of stabilizing intermolecular C---C, C---S and C---Se contacts in the longitudinal and transversal projections of the single crystals is postulated on the grounds of the previous high-resolution X-ray data for octathio[8]circulene; it is supported by the present QTAIM calculations and also predicted in some new details for both circulenes. We suggest that the appearance of the observed red color for the monocrystalline octathio[8]circulene is caused by strong intermolecular interactions between the molecules in the single crystal. However, the intermolecular interactions for the sym-tetraselenatetrathio[8]circulene crystal fragment are weaker and molecular layers are more friable in comparison to octathio[8]circulene crystal structure. These lead to the absence of visible absorption for the sym-tetraselenatetrathio[8]circulene crystal.
高对称八噻[8]轮烯和对称四硒代四噻[8]轮烯的单晶结构在密度泛函理论(DFT)水平上进行了研究,采用了分子中的原子量子理论(QTAIMs)方法对电子密度分布进行分析。根据先前对八噻[8]轮烯的高分辨率 X 射线数据,提出了在单晶的纵向和横向投影中存在稳定的分子间 C-C、C-S 和 C-Se 接触的假设;这得到了目前 QTAIM 计算的支持,并且在这两种轮烯的一些新细节中也得到了预测。我们认为,观察到的单晶八噻[8]轮烯的红色是由于单晶中分子之间存在强烈的分子间相互作用。然而,与八噻[8]轮烯晶体结构相比,对称四硒代四噻[8]轮烯晶体片段的分子间相互作用较弱,分子层较脆弱。这导致对称四硒代四噻[8]轮烯晶体不存在可见吸收。