Department of Molecular Cellular and Developmental Biology, ‡Department of Molecular Biophysics and Biochemistry, and §Department of Cell Biology, Yale University , P.O. Box 208103, New Haven, Connecticut 06520-8103, United States.
Biochemistry. 2013 Sep 17;52(37):6456-66. doi: 10.1021/bi400682n. Epub 2013 Aug 30.
Profilin binds not only to actin monomers but also to the barbed end of the actin filament, where it inhibits association of subunits. To address open questions about the interactions of profilin with barbed ends, we measured the effects of a wide range of concentrations of Homo sapiens profilin 1 on the rate of elongation of individual skeletal muscle actin filaments by total internal reflection fluorescence microscopy. Much higher concentrations of profilin were required to stop elongation by AMP-PNP-actin monomers than ADP-actin monomers. High concentrations of profilin depolymerized barbed ends at a rate much faster than the spontaneous dissociation rates of Mg-ATP-, Mg-AMP-PNP-, Mg-ADP-Pi-, and Mg-ADP-actin subunits. Fitting a thermodynamic model to these data allowed us to determine the affinities of profilin and profilin-actin for barbed ends and the influence of the nucleotide bound to actin on these interactions. Profilin has a much higher affinity for ADP-actin filament barbed ends (Kd = 1 μM) than AMP-PNP-actin filament barbed ends (Kd = 226 μM). ADP-actin monomers associated with profilin bind to ADP-actin filament barbed ends 10% as fast as free ADP-actin monomers, but bound profilin does not affect the rate of association of AMP-PNP-actin monomers with barbed ends. The differences in the affinities of AMP-PNP- and ADP-bound barbed ends for profilin and profilin-actin suggest that conformations of barbed end subunits differ from those of monomers and change upon nucleotide hydrolysis and phosphate release. A structural model revealed minor steric clashes between profilin and actin subunits at the barbed end that explain the biochemical results.
原肌球蛋白不仅与肌动蛋白单体结合,还与肌动蛋白丝的暴露出的末端结合,在那里它抑制亚基的结合。为了解决原肌球蛋白与暴露出的末端相互作用的一些悬而未决的问题,我们使用全内反射荧光显微镜测量了广泛浓度的人源原肌球蛋白 1 对单个骨骼肌肌动蛋白丝延伸速度的影响。与 ADP-肌动蛋白单体相比,AMP-PNP-肌动蛋白单体需要更高浓度的原肌球蛋白才能停止延伸。原肌球蛋白的高浓度以比 Mg-ATP-、Mg-AMP-PNP-、Mg-ADP-Pi-和 Mg-ADP-肌动蛋白亚基自发解离速率更快的速度解聚暴露出的末端。将热力学模型拟合到这些数据中,使我们能够确定原肌球蛋白和原肌球蛋白-肌动蛋白与暴露出的末端的亲和力,以及与肌动蛋白结合的核苷酸对这些相互作用的影响。原肌球蛋白与 ADP-肌动蛋白丝暴露出的末端的亲和力(Kd = 1 μM)远高于与 AMP-PNP-肌动蛋白丝暴露出的末端的亲和力(Kd = 226 μM)。与原肌球蛋白结合的 ADP-肌动蛋白单体与 ADP-肌动蛋白丝暴露出的末端的结合速度比游离的 ADP-肌动蛋白单体快 10%,但结合的原肌球蛋白不影响 AMP-PNP-肌动蛋白单体与暴露出的末端的结合速度。AMP-PNP-和 ADP-结合的暴露出的末端与原肌球蛋白和原肌球蛋白-肌动蛋白的亲和力差异表明,暴露出的末端亚基的构象与单体的构象不同,并在核苷酸水解和磷酸盐释放后发生变化。结构模型显示,原肌球蛋白和肌动蛋白亚基在暴露出的末端存在微小的空间位阻冲突,这解释了生化结果。