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V(IV)O²⁺与人体血清转铁蛋白的铁结合部位的结合。理论研究。

Binding of V(IV)O²⁺ to the Fe binding sites of human serum transferrin. A theoretical study.

出版信息

J Biol Inorg Chem. 2013 Oct;18(7):803-13. doi: 10.1007/s00775-013-1029-x.

Abstract

The binding of V(IV)O²⁺ to human serum transferrin (hTF) at the FeIII binding sites is addressed. Geometry optimization calculations were performed for the binding of V(IV)O²⁺ to the N-terminal lobe of hTF (hTFN), and indicate that in the presence of CO₃²⁻ or HCO₃ −, V(IV) is bound to five atoms in a distorted geometry. The structures of V(IV)O-hTFN species optimized at the semiempirical level were also used to calculate the ⁵¹V and ¹⁴N A tensors by density functional theory methods, and were compared with the reported experimental values. Globally, of all the calculated V(IV)O-hTF structures, the one that yields the lowest calculated heats of formation and minimum deviations from the experimental values of the ⁵¹V and ¹⁴N A tensor components is the structure that includes CO₃²⁻ as a synergistic anion. In this structure the V=O bond length is approximately 1.6 Å, and the vanadium atom is also coordinated to the phenolate oxygen atom of Tyr188 (at approximately 1.9 Å), the aspartate oxygen atom of Asp63 (at approximately 1.9 Å), the His249 Nτ atom (at approximately 2.1 Å), and a carbonate oxygen atom (at approximately 1.8 Å). The Tyr95 phenolic ocygen atom is approximately 3.3 Å from the metal center, and thus is very weakly bound to V(IV). All of these oxygen atoms are able to establish dipolar interactions with groups of the protein.

摘要

研究了 V(IV)O²⁺与人类血清转铁蛋白(hTF)在 FeIII 结合位点的结合。针对 V(IV)O²⁺与 hTF 的 N 端结构域(hTFN)的结合进行了几何优化计算,结果表明,在 CO₃²⁻或 HCO₃ -存在的情况下,V(IV)以变形的几何结构与五个原子结合。还使用在半经验水平上优化的 V(IV)O-hTFN 物种结构通过密度泛函理论方法计算了 ⁵¹V 和 ¹⁴N A 张量,并与报道的实验值进行了比较。总体而言,在所计算的所有 V(IV)O-hTF 结构中,生成的形成热最低且 ⁵¹V 和 ¹⁴N A 张量分量的实验值偏差最小的结构是包含 CO₃²⁻作为协同阴离子的结构。在该结构中,V=O 键长约为 1.6 Å,钒原子还与 Tyr188 的酚氧基(约 1.9 Å)、Asp63 的天冬氨酸氧原子(约 1.9 Å)、His249 Nτ 原子(约 2.1 Å)和碳酸根氧原子(约 1.8 Å)配位。Tyr95 酚类 ocygen 原子与金属中心的距离约为 3.3 Å,因此与 V(IV)的结合非常弱。所有这些氧原子都能够与蛋白质的基团建立偶极相互作用。

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