Ishii Kunihiko, Tahara Tahei
Molecular Spectroscopy Laboratory, RIKEN , 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.
J Phys Chem B. 2013 Oct 3;117(39):11423-32. doi: 10.1021/jp406864e. Epub 2013 Sep 12.
In the preceding article, we introduced the theoretical framework of two-dimensional fluorescence lifetime correlation spectroscopy (2D FLCS). In this article, we report the experimental implementation of 2D FLCS. In this method, two-dimensional emission-delay correlation maps are constructed from the photon data obtained with the time-correlated single photon counting (TCSPC), and then they are converted to 2D lifetime correlation maps by the inverse Laplace transform. We develop a numerical method to realize reliable transformation, employing the maximum entropy method (MEM). We apply the developed actual 2D FLCS to two real systems, a dye mixture and a DNA hairpin. For the dye mixture, we show that 2D FLCS is experimentally feasible and that it can identify different species in an inhomogeneous sample without any prior knowledge. The application to the DNA hairpin demonstrates that 2D FLCS can disclose microsecond spontaneous dynamics of biological molecules in a visually comprehensible manner, through identifying species as unique lifetime distributions. A FRET pair is attached to the both ends of the DNA hairpin, and the different structures of the DNA hairpin are distinguished as different fluorescence lifetimes in 2D FLCS. By constructing the 2D correlation maps of the fluorescence lifetime of the FRET donor, the equilibrium dynamics between the open and the closed forms of the DNA hairpin is clearly observed as the appearance of the cross peaks between the corresponding fluorescence lifetimes. This equilibrium dynamics of the DNA hairpin is clearly separated from the acceptor-missing DNA that appears as an isolated diagonal peak in the 2D maps. The present study clearly shows that newly developed 2D FLCS can disclose spontaneous structural dynamics of biological molecules with microsecond time resolution.
在前一篇文章中,我们介绍了二维荧光寿命相关光谱(2D FLCS)的理论框架。在本文中,我们报告了2D FLCS的实验实现。在该方法中,二维发射延迟相关图由时间相关单光子计数(TCSPC)获得的光子数据构建而成,然后通过拉普拉斯逆变换将其转换为二维寿命相关图。我们开发了一种数值方法,采用最大熵方法(MEM)来实现可靠的变换。我们将所开发的实际2D FLCS应用于两个实际系统,一种染料混合物和一个DNA发夹。对于染料混合物,我们表明2D FLCS在实验上是可行的,并且它可以在无需任何先验知识的情况下识别不均匀样品中的不同物种。对DNA发夹的应用表明,2D FLCS能够以视觉上可理解的方式揭示生物分子的微秒级自发动力学,通过将物种识别为独特的寿命分布。一个荧光共振能量转移(FRET)对连接到DNA发夹的两端,并且在2D FLCS中,DNA发夹的不同结构被区分为不同的荧光寿命。通过构建FRET供体荧光寿命的二维相关图,DNA发夹开放和闭合形式之间的平衡动力学清晰地表现为相应荧光寿命之间交叉峰的出现。DNA发夹的这种平衡动力学与受体缺失的DNA明显区分开来,后者在二维图中表现为孤立的对角峰。本研究清楚地表明,新开发的2D FLCS能够以微秒级时间分辨率揭示生物分子的自发结构动力学。