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在大肠杆菌中钼辅因子生物合成过程中双钼喋呤中间体的鉴定。

Identification of a bis-molybdopterin intermediate in molybdenum cofactor biosynthesis in Escherichia coli.

机构信息

From the Institute for Biochemistry and Biology, Department of Molecular Enzymology, and.

出版信息

J Biol Chem. 2013 Oct 11;288(41):29736-45. doi: 10.1074/jbc.M113.497453. Epub 2013 Sep 3.

Abstract

The molybdenum cofactor is an important cofactor, and its biosynthesis is essential for many organisms, including humans. Its basic form comprises a single molybdopterin (MPT) unit, which binds a molybdenum ion bearing three oxygen ligands via a dithiolene function, thus forming Mo-MPT. In bacteria, this form is modified to form the bis-MPT guanine dinucleotide cofactor with two MPT units coordinated at one molybdenum atom, which additionally contains GMPs bound to the terminal phosphate group of the MPTs (bis-MGD). The MobA protein catalyzes the nucleotide addition to MPT, but the mechanism of the biosynthesis of the bis-MGD cofactor has remained enigmatic. We have established an in vitro system for studying bis-MGD assembly using purified compounds. Quantification of the MPT/molybdenum and molybdenum/phosphorus ratios, time-dependent assays for MPT and MGD detection, and determination of the numbers and lengths of Mo-S and Mo-O bonds by X-ray absorption spectroscopy enabled identification of a novel bis-Mo-MPT intermediate on MobA prior to nucleotide attachment. The addition of Mg-GTP to MobA loaded with bis-Mo-MPT resulted in formation and release of the final bis-MGD product. This cofactor was fully functional and reconstituted the catalytic activity of apo-TMAO reductase (TorA). We propose a reaction sequence for bis-MGD formation, which involves 1) the formation of bis-Mo-MPT, 2) the addition of two GMP units to form bis-MGD on MobA, and 3) the release and transfer of the mature cofactor to the target protein TorA, in a reaction that is supported by the specific chaperone TorD, resulting in an active molybdoenzyme.

摘要

钼辅因子是一种重要的辅因子,其生物合成对于包括人类在内的许多生物体都是必不可少的。它的基本形式包含一个单一的钼喋呤(MPT)单元,通过二硫醇功能与一个带有三个氧配体的钼离子结合,从而形成 Mo-MPT。在细菌中,这种形式被修饰成含有两个 MPT 单元的双 MPT 鸟嘌呤二核苷酸辅因子,其中一个钼原子上的两个 MPT 单元配位,此外还包含结合在 MPT 末端磷酸基团上的 GMPs(双 MGD)。MobA 蛋白催化 MPT 的核苷酸添加,但双 MGD 辅因子的生物合成机制仍然神秘。我们已经建立了使用纯化化合物研究双 MGD 组装的体外系统。通过定量测定 MPT/钼和钼/磷的比例、进行 MPT 和 MGD 检测的时间依赖性测定,以及通过 X 射线吸收光谱确定 Mo-S 和 Mo-O 键的数量和长度,确定了在核苷酸添加之前在 MobA 上形成的新型双 Mo-MPT 中间产物。将 Mg-GTP 添加到负载双 Mo-MPT 的 MobA 上,导致最终的双 MGD 产物的形成和释放。这种辅因子是完全功能性的,并且重新构建了脱辅基 TMAO 还原酶(TorA)的催化活性。我们提出了双 MGD 形成的反应序列,其中包括 1)形成双 Mo-MPT,2)在 MobA 上将两个 GMP 单元添加到形成双 MGD,3)成熟辅因子向靶蛋白 TorA 的释放和转移,在反应中得到特定伴侣蛋白 TorD 的支持,从而产生活性钼酶。

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