Institute of Neuroscience and Medicine (INM-1, INM-4), Forschungszentrum Jülich, Wilhelm-Johnen-Straße, 52425 Jülich, Germany.
J Neurosci Methods. 2013 Oct 30;220(1):30-8. doi: 10.1016/j.jneumeth.2013.08.022. Epub 2013 Sep 5.
Polarized light imaging (PLI) has evolved into a powerful neuroimaging tool to analyze fiber tracts with submillimeter resolution in microtome sections of postmortem human brain tissue. In PLI polarized light changes its polarization state while passing through birefringent tissue, i.e., myelinated axons, which results in sinusoidal signals that characterize different fiber orientations. Noise, light scatter and filter inhomogeneities of the polarimeter interfere with the original sinusoidal PLI signals, which have direct effects on the accuracy of subsequent fiber modeling. New method: In our recent publications we have shown that the sinusoidal signal at each pixel location in PLI images can be restored utilizing independent component analysis (ICA). We now have further improved the signal separation quality by introducing a new constrained ICA algorithm (cICAP) where the component selection is directly included. In cICAP an analytical expression of the expected signal of interest is implemented as a priori information.
The algorithm precisely decomposes the deteriorated PLI signals into its underlying source signals. As such, the approach enhances sinusoidal basis functions and is therefore optimal for the extraction of independent spatial maps from PLI images. Comparison with existing methods: The new algorithm performs better and is faster compared to other well-known ICA algorithms.
The decomposition in cICAP is optimal with respect to separation and identification of the sinusoidal nature of the PLI signal. In this way the identification of the relevant components is automatically included and does not require any further component selection tool.
偏光成像(PLI)已发展成为一种强大的神经影像学工具,可分析死后人脑组织的切片中具有亚毫米分辨率的纤维束。在 PLI 中,偏振光在通过双折射组织(即有髓轴突)时会改变其偏振状态,从而产生正弦信号,这些信号表征了不同的纤维方向。偏振仪的噪声、光散射和滤波器不均匀性会干扰原始正弦 PLI 信号,这直接影响后续纤维建模的准确性。新方法:在我们最近的出版物中,我们已经表明可以利用独立成分分析(ICA)来恢复 PLI 图像中每个像素位置的正弦信号。我们现在通过引入一种新的约束 ICA 算法(cICAP)进一步提高了信号分离质量,该算法直接包括了组件选择。在 cICAP 中,感兴趣的预期信号的解析表达式被实现为先验信息。
该算法精确地将退化的 PLI 信号分解为其基础源信号。因此,该方法增强了正弦基函数,因此非常适合从 PLI 图像中提取独立的空间图谱。与现有方法的比较:与其他知名的 ICA 算法相比,新算法的性能更好,速度也更快。
cICAP 的分解在分离和识别 PLI 信号的正弦性质方面是最优的。通过这种方式,自动包括了相关组件的识别,并且不需要任何进一步的组件选择工具。