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转录噪声在 c-fos c-jun 途径中传播的障碍。

Barriers to transmission of transcriptional noise in a c-fos c-jun pathway.

机构信息

1] Public Health Research Institute, New Jersey Medical School, Rutgers University, Newark, NJ, USA [2] Department of Biological Chemistry, New Jersey Institute of Technology, Newark, NJ, USA.

出版信息

Mol Syst Biol. 2013;9:687. doi: 10.1038/msb.2013.45.

Abstract

We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by binding to them as heterodimers. We found that, even though they are coordinately expressed at the population level, in individual cells the expression of c-fos and c-jun is noisy and uncorrelated with each other. The expression of the downstream genes is also noisy, but there is little or no effect of the noise in the upstream genes on the expression of the downstream genes. The noise is not transmitted, because the number of heterodimers present in single cells is relatively invariant, and the induction of downstream genes is insensitive to the number of heterodimers in individual cells. Sequestration of promoters of the downstream genes within compact chromatin is a likely cause of this insensitivity. These barriers to the propagation and amplification of noise are likely to be commonplace in higher eukaryotes.

摘要

我们通过研究转录因子 c-fos 和 c-jun 对两个下游基因的诱导,探讨了转录噪声在基因调控途径中的传播方式。它们在细胞受到血清刺激后短暂产生,然后通过作为异二聚体与它们结合来激活靶基因的启动子。我们发现,尽管它们在群体水平上协调表达,但在单个细胞中,c-fos 和 c-jun 的表达是嘈杂的,彼此之间没有相关性。下游基因的表达也存在噪声,但上游基因的噪声对下游基因的表达几乎没有影响。噪声不会传播,因为单个细胞中存在的异二聚体数量相对不变,下游基因的诱导对单个细胞中的异二聚体数量不敏感。下游基因启动子在紧密染色质内的隔离可能是这种不敏感性的原因。这种对噪声传播和放大的障碍在高等真核生物中可能很常见。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1132/3792345/80f7457c66cb/msb201345-f1.jpg

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