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基于斯坦纳三元系的三元随机图中的模式

Motifs in triadic random graphs based on Steiner triple systems.

作者信息

Winkler Marco, Reichardt Jörg

机构信息

Institute for Theoretical Physics, University of Würzburg, Am Hubland, 97074 Würzburg, Germany.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Aug;88(2):022805. doi: 10.1103/PhysRevE.88.022805. Epub 2013 Aug 7.

DOI:10.1103/PhysRevE.88.022805
PMID:24032881
Abstract

Conventionally, pairwise relationships between nodes are considered to be the fundamental building blocks of complex networks. However, over the last decade, the overabundance of certain subnetwork patterns, i.e., the so-called motifs, has attracted much attention. It has been hypothesized that these motifs, instead of links, serve as the building blocks of network structures. Although the relation between a network's topology and the general properties of the system, such as its function, its robustness against perturbations, or its efficiency in spreading information, is the central theme of network science, there is still a lack of sound generative models needed for testing the functional role of subgraph motifs. Our work aims to overcome this limitation. We employ the framework of exponential random graph models (ERGMs) to define models based on triadic substructures. The fact that only a small portion of triads can actually be set independently poses a challenge for the formulation of such models. To overcome this obstacle, we use Steiner triple systems (STSs). These are partitions of sets of nodes into pair-disjoint triads, which thus can be specified independently. Combining the concepts of ERGMs and STSs, we suggest generative models capable of generating ensembles of networks with nontrivial triadic Z-score profiles. Further, we discover inevitable correlations between the abundance of triad patterns, which occur solely for statistical reasons and need to be taken into account when discussing the functional implications of motif statistics. Moreover, we calculate the degree distributions of our triadic random graphs analytically.

摘要

传统上,节点之间的成对关系被视为复杂网络的基本构建块。然而,在过去十年中,某些子网模式(即所谓的基序)的过度出现引起了广泛关注。据推测,这些基序而非链接,才是网络结构的构建块。尽管网络拓扑与系统的一般属性(如功能、对扰动的鲁棒性或信息传播效率)之间的关系是网络科学的核心主题,但仍缺乏用于测试子图基序功能作用所需的完善生成模型。我们的工作旨在克服这一局限性。我们采用指数随机图模型(ERGMs)框架来定义基于三元子结构的模型。实际上只有一小部分三元组可以独立设置这一事实,给此类模型的制定带来了挑战。为克服这一障碍,我们使用施泰纳三元系(STSs)。这些是将节点集划分为互不相交的三元组,因此可以独立指定。结合ERGMs和STSs的概念,我们提出了能够生成具有非平凡三元Z分数分布的网络集合的生成模型。此外,我们发现了仅出于统计原因而出现的三元组模式丰度之间不可避免的相关性,在讨论基序统计的功能含义时需要考虑这些相关性。而且,我们通过解析计算了三元随机图的度分布。

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