Orengo-Mercado Carmelo, Nieves Bianca, López Lizbeth, Vallés-Ortiz Nabila, Renta Jessicca Y, Santiago-Borrero Pedro J, Cadilla Carmen L, Duconge Jorge
Department of Biochemistry, School of Medicine, University of Puerto Rico, San Juan, Puerto Rico, USA.
J Pharmacogenomics Pharmacoproteomics. 2013 Mar 27;4(113). doi: 10.4172/2153-0645.1000113.
This cross-sectional study was aimed at determining the allele frequencies for the and (rs662) polymorphisms in the Puerto Rican population. The and genes are known to be associated with functional changes in drug metabolism and activation. Individuals carrying the aforementioned polymorphisms are at a higher risk of suffering from drug-induced adverse events and/ or unresponsiveness from a variety of drugs that includes antidepressants, atypical antipsychotics and antiplatelet compounds. Information on the frequency of these polymorphisms is more commonly found on homogeneous populations, but is scarce in highly heterogeneous populations like Hispanics, as in the case of Puerto Ricans.
Genotyping was carried out in 100 genomic DNA samples from dried blood spots supplied by the Puerto Rican Newborn Screening program using Taqman® Genotyping Assays.
The Minor Allele Frequencies (MAF) obtained were 9% for and 50% for (rs662), while the variant was not detected in our study. Furthermore, Hardy Weinberg equilibrium analysis was assessed as well as a comparison between Puerto Rico and other reference populations using a Z-test for proportions.
The observed allele and genotype frequencies on these relevant pharmacogenes in Puerto Ricans were more closely related to those early reported in two other reference populations of Americans (Mexicans and Colombians).
本横断面研究旨在确定波多黎各人群中CYP2D6和CYP2C19(rs662)基因多态性的等位基因频率。已知CYP2D6和CYP2C19基因与药物代谢和激活的功能变化有关。携带上述多态性的个体更容易发生药物引起的不良事件和/或对包括抗抑郁药、非典型抗精神病药和抗血小板化合物在内的多种药物无反应。关于这些多态性频率的信息在同质人群中较为常见,但在像西班牙裔这样高度异质的人群中却很稀少,波多黎各人就是如此。
使用Taqman®基因分型检测方法,对来自波多黎各新生儿筛查项目提供的干血斑中的100份基因组DNA样本进行基因分型。
获得的次要等位基因频率(MAF),CYP2D6为9%,CYP2C19(rs662)为50%,而在我们的研究中未检测到CYP2D6变体。此外,还进行了哈迪-温伯格平衡分析,并使用比例Z检验对波多黎各与其他参考人群进行了比较。
在波多黎各人中观察到的这些相关药物基因的等位基因和基因型频率,与另外两个美国参考人群(墨西哥人和哥伦比亚人)早期报告的频率更为接近。