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基于天然产物西蒙环菌素 D8 的黄酮类似物作为 DNA 拓扑异构酶抑制剂。

Flavone-based analogues inspired by the natural product simocyclinone D8 as DNA gyrase inhibitors.

机构信息

Department of Medicinal Chemistry, School of Pharmacy, Virginia Commonwealth University, Biotech 1, 800 East Leigh Street, Richmond, VA 23298, USA.

出版信息

Bioorg Med Chem Lett. 2013 Nov 1;23(21):5874-7. doi: 10.1016/j.bmcl.2013.08.094. Epub 2013 Sep 5.

DOI:10.1016/j.bmcl.2013.08.094
PMID:24060488
Abstract

The increasing occurrence of drug-resistant bacterial infections in the clinic has created a need for new antibacterial agents. Natural products have historically been a rich source of both antibiotics and lead compounds for new antibacterial agents. The natural product simocyclinone D8 (SD8) has been reported to inhibit DNA gyrase, a validated antibacterial drug target, by a unique catalytic inhibition mechanism of action. In this work, we have prepared simplified flavone-based analogues inspired by the complex natural product and evaluated their inhibitory activity and mechanism of action. While two of these compounds do inhibit DNA gyrase, they do so by a different mechanism of action than SD8, namely DNA intercalation.

摘要

临床上耐药菌感染的日益增多,使得人们需要开发新的抗菌药物。天然产物一直是抗生素和新型抗菌药物先导化合物的重要来源。天然产物西蒙环菌素 D8(SD8)通过一种独特的催化抑制作用机制,被报道能够抑制拓扑异构酶 II,这是一种经过验证的抗菌药物靶点。在这项工作中,我们受复杂天然产物的启发,制备了简化的黄酮类类似物,并评估了它们的抑制活性和作用机制。虽然其中两种化合物确实能抑制拓扑异构酶 II,但它们的作用机制与 SD8 不同,即 DNA 嵌入。

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Flavone-based analogues inspired by the natural product simocyclinone D8 as DNA gyrase inhibitors.基于天然产物西蒙环菌素 D8 的黄酮类似物作为 DNA 拓扑异构酶抑制剂。
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A crystal structure of the bifunctional antibiotic simocyclinone D8, bound to DNA gyrase.双功能抗生素西蒙菌素 D8 与 DNA 拓扑异构酶的晶体结构。
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