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金黄色葡萄球菌的多位点序列分型

Multilocus sequence typing (MLST) of Staphylococcus aureus.

作者信息

Saunders Nicholas A, Holmes Anne

机构信息

Communicable Disease Microbiology Services Support Division, Centre for Infections, Health Protection Agency, London, UK.

出版信息

Methods Mol Biol. 2014;1085:113-30. doi: 10.1007/978-1-62703-664-1_7.

Abstract

MLST is a widely accepted method of sequence-based typing that relies on analysis of relatively conserved genes that encode essential proteins. For Staphylococcus aureus the level of discrimination provided by MLST is sufficient to provide a relatively detailed picture of the global dissemination of the pathogen. The method is not restrictive in the precise methodology used to acquire the sequences, but the method of assigning types requires that the data be of high quality. Excellent web-based tools have been developed and are curated by the groups that launched MLST. These tools have allowed the scheme to be maintained as a coherent global asset and assist users in the analysis of their data.

摘要

多位点序列分型(MLST)是一种广泛接受的基于序列的分型方法,它依赖于对编码必需蛋白质的相对保守基因进行分析。对于金黄色葡萄球菌,MLST提供的鉴别水平足以较为详细地呈现该病原体在全球的传播情况。该方法对获取序列所使用的精确方法没有限制,但分型方法要求数据具有高质量。已经开发了出色的基于网络的工具,并由发起MLST的团队进行管理。这些工具使该方案能够作为一项连贯的全球资源得以维持,并协助用户分析他们的数据。

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