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海胆 Cyclin D 基因的发育调控分析。

Developmental cis-regulatory analysis of the cyclin D gene in the sea urchin Strongylocentrotus purpuratus.

机构信息

Mount Desert Island Biological Laboratory, PO Box 35, Salisbury Cove, ME 04672, USA; The Graduate School of Biomedical Science and Engineering, The University of Maine, Orono, ME 04469, USA.

出版信息

Biochem Biophys Res Commun. 2013 Oct 25;440(3):413-8. doi: 10.1016/j.bbrc.2013.09.094. Epub 2013 Oct 1.

DOI:10.1016/j.bbrc.2013.09.094
PMID:24090975
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3871186/
Abstract

Cyclin D genes regulate the cell cycle, growth and differentiation in response to intercellular signaling. While the promoters of vertebrate cyclin D genes have been analyzed, the cis-regulatory sequences across an entire cyclin D locus have not. Doing so would increase understanding of how cyclin D genes respond to the regulatory states established by developmental gene regulatory networks, linking cell cycle and growth control to the ontogenetic program. Therefore, we conducted a cis-regulatory analysis on the cyclin D gene, SpcycD, of the sea urchin, Strongylocentrotus purpuratus, during embryogenesis, identifying upstream and intronic sequences, located within six defined regions bearing one or more cis-regulatory modules each.

摘要

细胞周期蛋白 D 基因通过响应细胞间信号来调节细胞周期、生长和分化。虽然已经对脊椎动物细胞周期蛋白 D 基因的启动子进行了分析,但整个细胞周期蛋白 D 基因座的顺式调控序列尚未进行分析。这样做将增加对细胞周期蛋白 D 基因如何响应由发育基因调控网络建立的调控状态的理解,将细胞周期和生长控制与个体发生程序联系起来。因此,我们对海胆 Strongylocentrotus purpuratus 的细胞周期蛋白 D 基因 SpcycD 进行了顺式调控分析,鉴定了位于六个定义区域内的上游和内含子序列,每个区域都带有一个或多个顺式调控模块。

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本文引用的文献

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Proc Natl Acad Sci U S A. 2011 Jul 12;108(28):11632-7. doi: 10.1073/pnas.1106230108. Epub 2011 Jun 27.
2
Functional cis-regulatory genomics for systems biology.系统生物学的功能顺式调控基因组学。
Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3930-5. doi: 10.1073/pnas.1000147107. Epub 2010 Feb 8.
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Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo.控制海胆胚胎信号动态空间模式的基因调控网络子电路。
Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20089-94. doi: 10.1073/pnas.0806442105. Epub 2008 Dec 22.
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Runx expression is mitogenic and mutually linked to Wnt activity in blastula-stage sea urchin embryos.Runx基因的表达具有促有丝分裂作用,并且与囊胚期海胆胚胎中的Wnt活性相互关联。
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Transcriptional regulation of the cyclin D1 gene at a glance.细胞周期蛋白D1基因的转录调控一览。
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SpBase: the sea urchin genome database and web site.SpBase:海胆基因组数据库及网站。
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