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从 2500 万至 4000 万年前琥珀中分离出的细菌中的 luxS。

luxS in bacteria isolated from 25- to 40-million-year-old amber.

机构信息

Environmental Microbiology Laboratory, Department of Biology, University of Puerto Rico, Rico, San Juan, Puerto Rico; Department of Pathology, University of California, San Diego, CA, USA.

出版信息

FEMS Microbiol Lett. 2014 Jan;350(1):117-24. doi: 10.1111/1574-6968.12275. Epub 2013 Oct 7.

Abstract

Interspecies bacterial communication is mediated by autoinducer-2, whose synthesis depends on luxS. Due to the apparent universality of luxS (present in more than 40 bacterial species), it may have an ancient origin; however, no direct evidence is currently available. We amplified luxS in bacteria isolated from 25- to 40-million-year-old amber. The phylogenies and molecular clocks of luxS and the 16S rRNA gene from ancient and extant bacteria were determined as well. Luminescence assays using Vibrio harveyi BB170 aimed to determine the activity of luxS. While the phylogeny of luxS was very similar to that of extant Bacillus spp., amber isolates exhibited unique 16S rRNA gene phylogenies. This suggests that luxS may have been acquired by horizontal transfer millions of years ago. Molecular clocks of luxS suggest slow evolutionary rates, similar to those of the 16S rRNA gene and consistent with a conserved gene. Dendograms of the 16S rRNA gene and luxS show two separate clusters for the extant and ancient bacteria, confirming the uniqueness of the latter group.

摘要

种间细菌通讯是由自动诱导物-2 介导的,其合成取决于 luxS。由于 luxS 的明显普遍性(存在于 40 多种细菌中),它可能具有古老的起源;然而,目前没有直接的证据。我们从 2500 万至 4000 万年前琥珀中分离的细菌中扩增了 luxS。还确定了古老和现存细菌中 luxS 和 16S rRNA 基因的系统发育和分子钟。使用 Vibrio harveyi BB170 进行的生物发光测定旨在确定 luxS 的活性。尽管 luxS 的系统发育与现存的 Bacillus spp.非常相似,但琥珀中的分离物表现出独特的 16S rRNA 基因系统发育。这表明 luxS 可能在数百万年前通过水平转移获得。luxS 的分子钟表明进化速度缓慢,与 16S rRNA 基因相似,与保守基因一致。16S rRNA 基因和 luxS 的系统发育树显示现存和古代细菌有两个单独的聚类,证实了后者的独特性。

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