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结构指导的主要衣壳蛋白突变可重新靶向 BK 多瘤病毒。

A structure-guided mutation in the major capsid protein retargets BK polyomavirus.

机构信息

Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany.

出版信息

PLoS Pathog. 2013;9(10):e1003688. doi: 10.1371/journal.ppat.1003688. Epub 2013 Oct 10.

DOI:10.1371/journal.ppat.1003688
PMID:24130487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3795024/
Abstract

Viruses within a family often vary in their cellular tropism and pathogenicity. In many cases, these variations are due to viruses switching their specificity from one cell surface receptor to another. The structural requirements that underlie such receptor switching are not well understood especially for carbohydrate-binding viruses, as methods capable of structure-specificity studies are only relatively recently being developed for carbohydrates. We have characterized the receptor specificity, structure and infectivity of the human polyomavirus BKPyV, the causative agent of polyomavirus-associated nephropathy, and uncover a molecular switch for binding different carbohydrate receptors. We show that the b-series gangliosides GD3, GD2, GD1b and GT1b all can serve as receptors for BKPyV. The crystal structure of the BKPyV capsid protein VP1 in complex with GD3 reveals contacts with two sialic acid moieties in the receptor, providing a basis for the observed specificity. Comparison with the structure of simian virus 40 (SV40) VP1 bound to ganglioside GM1 identifies the amino acid at position 68 as a determinant of specificity. Mutation of this residue from lysine in BKPyV to serine in SV40 switches the receptor specificity of BKPyV from GD3 to GM1 both in vitro and in cell culture. Our findings highlight the plasticity of viral receptor binding sites and form a template to retarget viruses to different receptors and cell types.

摘要

家族内的病毒在细胞嗜性和致病性方面经常存在差异。在许多情况下,这些变化是由于病毒将其特异性从一种细胞表面受体切换到另一种受体。这种受体切换所基于的结构要求尚不清楚,特别是对于碳水化合物结合病毒,因为能够进行结构特异性研究的方法只是在最近才被开发出来用于碳水化合物。我们已经描述了人类多瘤病毒 BKPyV 的受体特异性、结构和感染力,BKPyV 是多瘤病毒相关性肾病的病原体,并揭示了一种用于结合不同碳水化合物受体的分子开关。我们表明,b 系列神经节苷脂 GD3、GD2、GD1b 和 GT1b 均可作为 BKPyV 的受体。BKPyV 衣壳蛋白 VP1 与 GD3 复合物的晶体结构揭示了与受体中两个唾液酸部分的接触,为观察到的特异性提供了基础。与结合神经节苷脂 GM1 的猿猴病毒 40(SV40)VP1 的结构进行比较,确定了位置 68 处的氨基酸是特异性的决定因素。将该残基从 BKPyV 中的赖氨酸突变为 SV40 中的丝氨酸,可将 BKPyV 的受体特异性从 GD3 切换到 GM1,无论是在体外还是在细胞培养中都是如此。我们的发现强调了病毒受体结合位点的可塑性,并为将病毒靶向不同受体和细胞类型提供了模板。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/e8d6719309d5/ppat.1003688.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/1e75426e062f/ppat.1003688.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/4a3fbd1f2512/ppat.1003688.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/1136ea0c7c9c/ppat.1003688.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/70dfc6211cf6/ppat.1003688.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/828ee44c867c/ppat.1003688.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/e8d6719309d5/ppat.1003688.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/1e75426e062f/ppat.1003688.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/4a3fbd1f2512/ppat.1003688.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/1136ea0c7c9c/ppat.1003688.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/70dfc6211cf6/ppat.1003688.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/828ee44c867c/ppat.1003688.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21e8/3795024/e8d6719309d5/ppat.1003688.g006.jpg

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本文引用的文献

1
Characterization of Ligand Binding by Saturation Transfer Difference NMR Spectroscopy.通过饱和转移差核磁共振波谱法对配体结合进行表征
Angew Chem Int Ed Engl. 1999 Jun 14;38(12):1784-1788. doi: 10.1002/(SICI)1521-3773(19990614)38:12<1784::AID-ANIE1784>3.0.CO;2-Q.
2
A cornucopia of human polyomaviruses.人类多瘤病毒的聚宝盆。
Nat Rev Microbiol. 2013 Apr;11(4):264-76. doi: 10.1038/nrmicro2992. Epub 2013 Mar 11.
3
Structures of Merkel cell polyomavirus VP1 complexes define a sialic acid binding site required for infection.
巨细胞多瘤病毒大量进入可诱导人肾近端小管上皮细胞出现暂时性细胞质空泡化。
PLoS Pathog. 2024 Nov 21;20(11):e1012681. doi: 10.1371/journal.ppat.1012681. eCollection 2024 Nov.
4
Uncloaking the viral glycocalyx: How do viruses exploit glycoimmune checkpoints?揭开病毒糖萼的神秘面纱:病毒如何利用糖免疫检查点?
Adv Virus Res. 2024;119:63-110. doi: 10.1016/bs.aivir.2024.03.001. Epub 2024 Apr 8.
5
Structural implications of BK polyomavirus sequence variations in the major viral capsid protein Vp1 and large T-antigen: a computational study.BK多瘤病毒主要病毒衣壳蛋白Vp1和大T抗原序列变异的结构影响:一项计算研究
mSphere. 2024 Apr 23;9(4):e0079923. doi: 10.1128/msphere.00799-23. Epub 2024 Mar 19.
6
Modelling BK Polyomavirus dissemination and cytopathology using polarized human renal tubule epithelial cells.使用极化的人肾近端小管上皮细胞建立 BK 多瘤病毒传播和细胞病理学模型。
PLoS Pathog. 2023 Aug 28;19(8):e1011622. doi: 10.1371/journal.ppat.1011622. eCollection 2023 Aug.
7
Characterization of a glycan-binding complex of minor pilins completes the analysis of type 4 pili subunits.糖基结合小菌毛蛋白复合物的特性分析完成了 4 型菌毛亚基的分析。
Proc Natl Acad Sci U S A. 2023 Jan 17;120(3):e2216237120. doi: 10.1073/pnas.2216237120. Epub 2023 Jan 10.
8
The role of the DE and EF loop of BKPyV VP1 in the serological cross-reactivity between subtypes.BKPyV VP1 的 DE 和 EF 环在亚型间血清交叉反应中的作用。
Virus Res. 2023 Jan 15;324:199031. doi: 10.1016/j.virusres.2022.199031. Epub 2022 Dec 29.
9
Dynamics and Patterning of 5-Hydroxytryptamine 2 Subtype Receptors in JC Polyomavirus Entry.5-羟色胺 2 型受体在 JC 多瘤病毒进入中的动力学和模式。
Viruses. 2022 Nov 22;14(12):2597. doi: 10.3390/v14122597.
10
Discovery of novel druggable pockets on polyomavirus VP1 through crystallographic fragment-based screening to develop capsid assembly inhibitors.通过基于晶体学片段筛选发现多瘤病毒VP1上的新型可成药口袋以开发衣壳组装抑制剂
RSC Chem Biol. 2022 Apr 29;3(8):1013-1027. doi: 10.1039/d2cb00052k. eCollection 2022 Aug 3.
Merkel 细胞多瘤病毒 VP1 复合物的结构定义了感染所需的唾液酸结合位点。
PLoS Pathog. 2012;8(7):e1002738. doi: 10.1371/journal.ppat.1002738. Epub 2012 Jul 26.
4
Structure-function analysis of the human JC polyomavirus establishes the LSTc pentasaccharide as a functional receptor motif.人类 JC 多瘤病毒的结构-功能分析确立了 LSTc 五糖作为功能性受体基序。
Cell Host Microbe. 2010 Oct 21;8(4):309-19. doi: 10.1016/j.chom.2010.09.004.
5
Lipids and proteins act in opposing manners to regulate polyomavirus infection.脂质和蛋白质以相反的方式作用来调节多瘤病毒感染。
J Virol. 2010 Oct;84(19):9840-52. doi: 10.1128/JVI.01093-10. Epub 2010 Jul 28.
6
Influenza hemagglutinin and neuraminidase membrane glycoproteins.流感血凝素和神经氨酸酶膜糖蛋白。
J Biol Chem. 2010 Sep 10;285(37):28403-9. doi: 10.1074/jbc.R110.129809. Epub 2010 Jun 10.
7
PHENIX: a comprehensive Python-based system for macromolecular structure solution.PHENIX:一个基于Python的用于大分子结构解析的综合系统。
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. doi: 10.1107/S0907444909052925. Epub 2010 Jan 22.
8
Integration, scaling, space-group assignment and post-refinement.整合、缩放、空间群确定及后续精修。
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):133-44. doi: 10.1107/S0907444909047374. Epub 2010 Jan 22.
9
STD-NMR used to elucidate the fine binding specificity of pathogenic anti-ganglioside antibodies directly in patient serum.STD-NMR用于直接在患者血清中阐明致病性抗神经节苷脂抗体的精细结合特异性。
Biochemistry. 2009 Jan 20;48(2):220-2. doi: 10.1021/bi802100u.
10
An arginine switch in the species B adenovirus knob determines high-affinity engagement of cellular receptor CD46.B 型腺病毒纤突中的精氨酸开关决定了细胞受体 CD46 的高亲和力结合。
J Virol. 2009 Jan;83(2):673-86. doi: 10.1128/JVI.01967-08. Epub 2008 Nov 5.