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在接受成功一线抗逆转录病毒治疗的患者中,通过单次和三次重复的HIV-1 RNA及DNA测序对HIV-1共受体嗜性进行纵向分析。

Longitudinal analysis of HIV-1 coreceptor tropism by single and triplicate HIV-1 RNA and DNA sequencing in patients undergoing successful first-line antiretroviral therapy.

作者信息

Meini Genny, Rossetti Barbara, Bianco Claudia, Ceccherini-Silberstein Francesca, Di Giambenedetto Simona, Sighinolfi Laura, Monno Laura, Castagna Antonella, Rozera Gabriella, D'Arminio Monforte Antonella, Zazzi Maurizio, De Luca Andrea

机构信息

Department of Medical Biotechnologies, University of Siena, Siena, Italy.

出版信息

J Antimicrob Chemother. 2014 Mar;69(3):735-41. doi: 10.1093/jac/dkt426. Epub 2013 Oct 23.

DOI:10.1093/jac/dkt426
PMID:24155059
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3954119/
Abstract

OBJECTIVES

Maraviroc has been shown to be effective in patients harbouring CCR5-tropic HIV-1. While this CCR5 antagonist has initially been used in salvage therapy, its excellent safety profile makes it ideal for antiretroviral treatment simplification strategies in patients with suppressed plasma viraemia. The aim of this study was to compare HIV-1 tropism as detected in baseline plasma RNA and peripheral blood mononuclear cell (PBMC) DNA prior to first-line therapy and to analyse tropism evolution while on successful treatment.

METHODS

HIV-1 tropism was determined using triplicate genotypic testing combined with geno2pheno[coreceptor] analysis at a 10% false positive rate in 42 patients. Paired pre-treatment plasma RNA and PBMC DNA and two subsequent PBMC DNA samples (the first obtained after reaching undetectable plasma HIV-1 RNA and the second after at least 2 years of suppression of plasma viraemia) were evaluated.

RESULTS

Coreceptor tropism was completely concordant in paired pre-treatment RNA and DNA, with 26.2% of HIV-1 sequences predicted to be non-CCR5-tropic. During follow-up, coreceptor tropism switches were detected in 4 (9.5%) patients without any preferential direction. Although false positive rate discrepancies within triplicates were common, the rate of discordance of coreceptor tropism assignment among triplicate results in this mostly CCR5-tropic dataset was only 2.1%, questioning the added value of triplicate testing compared with single testing.

CONCLUSIONS

HIV-1 coreceptor tropism changes during virologically successful first-line treatment are infrequent. HIV-1 DNA analysis may thus support the choice of a CCR5 antagonist in treatment switch strategies; however, maraviroc treatment outcome data are required to confirm this option.

摘要

目的

马拉维若已被证明对携带CCR5嗜性HIV-1的患者有效。虽然这种CCR5拮抗剂最初用于挽救治疗,但其出色的安全性使其成为血浆病毒血症得到抑制的患者抗逆转录病毒治疗简化策略的理想选择。本研究的目的是比较一线治疗前基线血浆RNA和外周血单个核细胞(PBMC)DNA中检测到的HIV-1嗜性,并分析成功治疗期间的嗜性演变。

方法

在42例患者中,采用一式三份的基因分型检测结合基因2表型[共受体]分析,以10%的假阳性率确定HIV-1嗜性。评估配对的治疗前血浆RNA和PBMC DNA以及随后的两个PBMC DNA样本(第一个在血浆HIV-1 RNA检测不到后获得,第二个在血浆病毒血症抑制至少2年后获得)。

结果

共受体嗜性在配对的治疗前RNA和DNA中完全一致,26.2%的HIV-1序列预计为非CCR5嗜性。在随访期间,4例(9.5%)患者检测到共受体嗜性转换,无任何偏好方向。虽然一式三份检测中假阳性率差异很常见,但在这个主要为CCR5嗜性的数据集中,一式三份检测结果中共受体嗜性分配的不一致率仅为2.1%,这对一式三份检测相对于单次检测的附加价值提出了质疑。

结论

在病毒学成功的一线治疗期间,HIV-1共受体嗜性变化很少见。因此,HIV-1 DNA分析可能有助于治疗转换策略中CCR5拮抗剂的选择;然而,需要马拉维若治疗结果数据来证实这一选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2727/3954119/385742982dfb/dkt42602.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2727/3954119/fb20d3c83038/dkt42601.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2727/3954119/385742982dfb/dkt42602.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2727/3954119/fb20d3c83038/dkt42601.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2727/3954119/385742982dfb/dkt42602.jpg

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本文引用的文献

1
Use of cellular HIV DNA to predict virologic response to maraviroc: performance of population-based and deep sequencing.利用细胞 HIV DNA 预测马拉维若治疗的病毒学反应:基于人群和深度测序的性能。
Clin Infect Dis. 2013 Jun;56(11):1659-66. doi: 10.1093/cid/cit105. Epub 2013 Feb 21.
2
Population-based sequencing of the V3-loop can predict the virological response to maraviroc in treatment-naive patients of the MERIT trial.基于人群的 V3 环区序列可预测 MERIT 试验中初治患者对马拉维若的病毒学应答。
J Acquir Immune Defic Syndr. 2012 Nov 1;61(3):279-86. doi: 10.1097/QAI.0b013e31826249cf.
3
A genotypic test for HIV-1 tropism combining Sanger sequencing with ultradeep sequencing predicts virologic response in treatment-experienced patients.
波兰 HIV-1 非 R5 株的传播模式。
Sci Rep. 2019 Mar 21;9(1):4970. doi: 10.1038/s41598-019-41407-7.
4
HIV-1 integrase strand-transfer inhibitor resistance in southern Taiwan.台湾南部地区HIV-1整合酶链转移抑制剂耐药情况
Oncotarget. 2018 May 18;9(38):24927-24935. doi: 10.18632/oncotarget.24837.
5
Switch to maraviroc with darunavir/r, both QD, in patients with suppressed HIV-1 was well tolerated but virologically inferior to standard antiretroviral therapy: 48-week results of a randomized trial.对于HIV-1得到抑制的患者,改用马拉维若与达芦那韦/利托那韦联合使用(均为每日一次),耐受性良好,但病毒学效果劣于标准抗逆转录病毒疗法:一项随机试验的48周结果
PLoS One. 2017 Nov 21;12(11):e0187393. doi: 10.1371/journal.pone.0187393. eCollection 2017.
6
Switch of predicted HIV-1 tropism in treated subjects and its association with disease progression.接受治疗的受试者中预测的HIV-1嗜性转换及其与疾病进展的关联。
Medicine (Baltimore). 2016 Nov;95(44):e5222. doi: 10.1097/MD.0000000000005222.
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Possible involvement of distinct phylogenetic clusters of HIV-1 variants in the discrepancies between coreceptor tropism predictions based on viral RNA and proviral DNA.基于病毒RNA和前病毒DNA的共受体嗜性预测之间的差异可能与HIV-1变体的不同系统发育簇有关。
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8
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一种结合桑格测序和超高深度测序的 HIV-1 嗜性基因检测可预测治疗经验丰富患者的病毒学应答。
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4
HIV population genotypic tropism testing and its clinical significance.HIV 人群基因型嗜性检测及其临床意义。
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5
Responses to switching to maraviroc-based antiretroviral therapy in treated patients with suppressed plasma HIV-1-RNA load.治疗后 HIV-1 RNA 载量得到抑制的患者换用马拉维若治疗的应答反应。
Intervirology. 2012;55(2):172-8. doi: 10.1159/000332023. Epub 2012 Jan 24.
6
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7
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8
Improved V3 genotyping with duplicate PCR amplification for determining HIV-1 tropism.采用重复 PCR 扩增进行 HIV-1 嗜性测定的 V3 基因分型改进
J Antimicrob Chemother. 2011 Sep;66(9):1972-5. doi: 10.1093/jac/dkr224. Epub 2011 Jun 14.
9
Genotypic prediction of human immunodeficiency virus type 1 tropism by use of plasma and peripheral blood mononuclear cells in the routine clinical laboratory.在常规临床实验室中,通过使用血浆和外周血单核细胞对人类免疫缺陷病毒 1 型的嗜性进行基因预测。
J Clin Microbiol. 2011 Jul;49(7):2697-9. doi: 10.1128/JCM.00336-11. Epub 2011 May 18.
10
Concordance between HIV-1 genotypic coreceptor tropism predictions based on plasma RNA and proviral DNA.基于血浆 RNA 和前病毒 DNA 的 HIV-1 基因型核心受体嗜性预测的一致性。
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