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利用 RAPD 标记快速鉴定白冷杉种。

Rapid identification of white-Engelmann spruce species by RAPD markers.

机构信息

Department of Renewable Resources, University of Alberta, T6G 2H1, Edmonton, Alberta, Canada.

出版信息

Theor Appl Genet. 1996 Jan;92(1):46-52. doi: 10.1007/BF00222950.

DOI:10.1007/BF00222950
PMID:24166115
Abstract

Fragments of random amplified polymorphic DNA (RAPDs) were used as markers to distinguish Picea glauca (Moench) Voss (white spruce) and Picea engelmannii Parry (Engelmann spruce). These species and their putative hybrids are difficult to differentiate morphologically and are collectively known as interior spruce. Four oligodeoxynucleotide decamer primers showed species-specific amplification products between white spruce and Engelmann spruce. These fragments are highly conserved among seed lots and individual trees of each species from diverse geographic origins. The consistency and reproducibility of these species-specific amplification products were tested in more than two amplification reactions. Therefore, RAPD markers can provide genetic markers for easy and rapid identification of the specific genetic entry of these spruce species and their reported putative hybrids. According to the frequencies of the species-specific RAPD markers, it is possible to estimate the hybrid fraction, indicative of true introgression between the two species. These results are useful for quick identification of both species and their hybrid swarms at any stage in the sporophyte phase of the life cycle, for determining the occurrence and the magnitude of introgressive hybridization in an overlap zone between the two species, and for certification purposes in operational re-forestation and tree-improvement programs.

摘要

随机扩增多态性 DNA (RAPD) 片段被用作标记,以区分白云杉(Moench)Voss(白云杉)和恩格尔曼云杉(Parry)(恩格尔曼云杉)。这些物种及其可能的杂种在形态上难以区分,统称为内部云杉。四个寡脱氧核苷酸十聚体引物在白云杉和恩格尔曼云杉之间显示出物种特异性的扩增产物。这些片段在来自不同地理起源的每个物种的种子批和个体树木中高度保守。这些物种特异性扩增产物的一致性和可重复性在两次以上的扩增反应中进行了测试。因此,RAPD 标记可以为这些云杉物种及其报道的可能杂种的特定遗传品系的快速识别提供遗传标记。根据物种特异性 RAPD 标记的频率,可以估计杂种分数,表明两个物种之间存在真正的基因渗入。这些结果对于在生活史孢子体阶段的任何阶段快速识别这两个物种及其杂种群、确定两个物种重叠区渗入杂交的发生和程度以及在操作再造林和树木改良计划中进行认证都是有用的。

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本文引用的文献

1
Classifying seedlots of Picea sitchensis and P. glauca in zones of introgression using restriction analysis of chloroplast DNA.利用叶绿体 DNA 限制分析对处于杂交区的白云杉和黑云杉种源进行分类。
Theor Appl Genet. 1988 Dec;76(6):841-5. doi: 10.1007/BF00273669.
2
Parentage determination in maize hybrids using the arbitrarily primed polymerase chain reaction (AP-PCR).利用任意引物聚合酶链反应(AP-PCR)鉴定玉米杂种的亲代关系。
Theor Appl Genet. 1991 Jul;82(4):473-6. doi: 10.1007/BF00588601.
3
Inheritance of chloroplast and mitochondrial DNA in Picea and composition of hybrids from introgression zones.
通过RAPD产物的克隆和测序产生SCARs并进行表征:竹子物种特异性标记开发的一种策略
Ann Bot. 2005 Apr;95(5):835-41. doi: 10.1093/aob/mci088. Epub 2005 Feb 24.
叶绿体和线粒体 DNA 在云杉中的遗传以及杂交种在渐渗区的组成。
Theor Appl Genet. 1991 Aug;82(2):242-8. doi: 10.1007/BF00226220.
4
Segregation of random amplified DNA markers in F1 progeny of conifers.随机扩增多态性 DNA 标记在松科 F1 后代中的分离。
Theor Appl Genet. 1991 Dec;83(2):194-200. doi: 10.1007/BF00226251.
5
Segregating random amplified polymorphic DNAs (RAPDs) in Betula alleghaniensis.分离黄桦的随机扩增多态 DNA(RAPD)。
Theor Appl Genet. 1992 Nov;85(2-3):173-80. doi: 10.1007/BF00222856.
6
RAPDs as an aid to evaluate the genetic integrity of somatic embryogenesis-derived populations of Picea mariana (Mill.) B.S.P.RAPD 作为评估花旗松体细胞胚胎发生衍生群体遗传完整性的辅助手段。
Theor Appl Genet. 1993 Mar;86(1):81-7. doi: 10.1007/BF00223811.
7
Targeted mapping and linkage analysis of morphological isozyme, and RAPD markers in peach.桃形态同工酶、RAPD 标记的定位作图与连锁分析。
Theor Appl Genet. 1994 Feb;87(7):805-15. doi: 10.1007/BF00221132.
8
A partial genetic linkage map of slash pine (Pinus elliottii Engelm. var. elliottii) based on random amplified polymorphic DNAs.基于随机扩增多态性 DNA 的湿地松(Pinus elliottii Engelm. var. elliottii)部分遗传连锁图谱。
Theor Appl Genet. 1993 Oct;87(1-2):145-51. doi: 10.1007/BF00223758.
9
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Theor Appl Genet. 1995 Jul;91(1):142-9. doi: 10.1007/BF00220871.