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基于 PCR 的标记生成,用于检测小麦背景中的黑麦染色质。

Generation of PCR-based markers for the detection of rye chromatin in a wheat background.

机构信息

Cereals Research Department, John Innes Centre, Norwich Research Park, NR4 7UJ, Colney, UK.

出版信息

Theor Appl Genet. 1995 Apr;90(5):740-5. doi: 10.1007/BF00222142.

DOI:10.1007/BF00222142
PMID:24174036
Abstract

Oligonucleotide primers were developed to detect the presence of four rye sequences using a PCR assay. These assays give a rye-specific signal from wheat DNA template which contains various rye chromosomes or chromosome segments. The sequences identified were associated with the nucleolar organiser region, the 5S-Rrna-R1 locus, the telomere, and a widely dispersed, rye-specific repetitive element Ris-1. The primers amplified from the well-established loci Nor-R1 and 5S-Rrna-R1 on rye chromosome arm 1RS, and also located a 5s-Rrna locus on chromosome 3R. The telomere-associated sequence was present on every rye chromosome, and was also present, at a low copy number, in both wheat and barley. These assays will be particularly useful for introgression programmes aimed at reducing the rye content of the 1BL.1RS wheat-rye translocation. When multiplexed, the primers will enable a rapid, simultaneous assay for a number of distinct rye loci, which can be derived from a small portion of mature endosperm tissue.

摘要

寡核苷酸引物被开发出来,用于使用 PCR 检测四种黑麦序列的存在。这些检测方法从含有各种黑麦染色体或染色体片段的小麦 DNA 模板中产生黑麦特异性信号。鉴定出的序列与核仁组织者区域、5S-Rrna-R1 基因座、端粒以及广泛分散的黑麦特异性重复元件 Ris-1 有关。这些引物从黑麦染色体 1RS 上的已建立好的 Nor-R1 和 5S-Rrna-R1 基因座扩增,也定位到了 3R 染色体上的一个 5s-Rrna 基因座。与端粒相关的序列存在于每一条黑麦染色体上,在小麦和大麦中也以低拷贝数存在。这些检测方法将特别有助于旨在降低 1BL.1RS 小麦-黑麦易位体中黑麦含量的导入计划。当多重检测时,这些引物将能够快速、同时检测多个不同的黑麦基因座,这些基因座可以从小麦成熟胚乳组织的一小部分中获得。

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本文引用的文献

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Induction of recombination between rye chromosome 1RL and wheat chromosomes.诱发黑麦 1RL 染色体与小麦染色体间的重组。
Theor Appl Genet. 1985 Dec;71(2):208-15. doi: 10.1007/BF00252057.
2
Controlled introgression to wheat of genes from rye chromosome arm 1RS by induction of allosyndesis : 2. Characterisation of recombinants.通过诱导异源联会将黑麦 1RS 染色体臂上的基因导入小麦的控制渐渗:2. 重组体的表征。
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Controlled introgression to wheat of genes from rye chromosome arm 1RS by induction of allosyndesis : 1. Isolation of recombinants.
利用小麦PLUG标记检测黑麦染色体臂的部分同源关系。
Chromosoma. 2013 Dec;122(6):555-64. doi: 10.1007/s00412-013-0428-7. Epub 2013 Jul 20.
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Partial resistance to powdery mildew in German spring wheat 'Naxos' is based on multiple genes with stable effects in diverse environments.德国春小麦品种“纳克索斯”对白粉病具有部分抗性,其抗性基于多个在不同环境中具有稳定效应的基因。
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Molecular detection of genomic regions associated with grain yield and yield-related components in an elite bread wheat cross evaluated under irrigated and rainfed conditions.在灌溉和雨养条件下评估的优良面包小麦杂交种中与粒产量和产量相关成分相关的基因组区域的分子检测。
Theor Appl Genet. 2010 Feb;120(3):527-41. doi: 10.1007/s00122-009-1173-4. Epub 2009 Oct 29.
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Lesion mimic associates with adult plant resistance to leaf rust infection in wheat.病斑模拟与小麦成株期对叶锈病感染的抗性相关。
Theor Appl Genet. 2009 Jun;119(1):13-21. doi: 10.1007/s00122-009-1012-7. Epub 2009 Mar 28.
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Multi-environment QTL mixed models for drought stress adaptation in wheat.用于小麦干旱胁迫适应性的多环境QTL混合模型
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Rapid isolation of recombinant lambda phage DNA for use in fluorescence in situ hybridization.用于荧光原位杂交的重组λ噬菌体DNA的快速分离
Chromosome Res. 1996 Aug;4(5):397-8. doi: 10.1007/BF02257276.
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4
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5
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Pre-germination genotypic screening using PCR amplification of half-seeds.半粒种子 PCR 扩增的发芽前基因型筛选。
Theor Appl Genet. 1993 Jul;86(6):694-8. doi: 10.1007/BF00222658.
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Physical mapping of the 5S rRNA multigene family in 6x triticale and rye: identification of a new rye locus.小麦族 6x 杂种小黑麦和黑麦中 5S rRNA 基因家族的物理作图:鉴定一个新的黑麦座位。
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