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社区获得性感染分离株中产extended-spectrum β-lactamase 的多重耐药大肠杆菌的流行情况,以及 ESBL 蛋白的计算机结构建模。

Prevalence of extended-spectrum β-lactamase-producing multidrug-resistant Escherichia coli among isolates from community-acquired infections and in silico structural modeling of an ESBL protein.

机构信息

1 Department of Microbiology, Centre for Research, Srimad Andavan Arts and Science College , Trichy, India .

出版信息

Microb Drug Resist. 2014 Apr;20(2):170-6. doi: 10.1089/mdr.2013.0088. Epub 2013 Nov 14.

Abstract

Escherichia coli is a common major cause of bacterial infections in tea tribe patients of the northeast region of Assam, India. In this study, we documented multidrug resistance (MDR) and the prevalence of extended-spectrum β-lactamases (ESBLs) among 148 E. coli strains that were isolated from bacterial infections in tea tribe patients who had a history of self-medication. High prevalence of resistance to ampicillin (82%), amoxicillin (68%), cefixime (60%), norfloxacin (60%), nalidixic acid (60%), and co-trimoxazole (53%) was observed. Of 148 E. coli isolates, 38 (26%) were confirmed as ESBL producers. The ESBL genes were sequenced from highly resistant ESBL producing E. coli isolates. Molecular modeling was performed using MODELLER 9v10 software to determine the three-dimensional structure of a protein. This result indicates that the prevailing reason for the high prevalence of antibiotic resistance in this community is prior exposure to low-quality antibiotics, hence MDR in E. coli is increasing. ESBLs are enzymes that are produced by resistant bacteria that hydrolyze advanced generations of cephalosporin antibiotics and cause resistance, even in patients with community-acquired infections. So our results provide a framework for understanding the structure and possible binding sites of ESBL proteins for drug targeting, and the results were found to be reliable.

摘要

大肠杆菌是印度阿萨姆邦东北部茶部落患者细菌感染的常见主要原因。在这项研究中,我们记录了 148 株从有自我用药史的茶部落患者细菌感染中分离出的大肠杆菌的多药耐药性(MDR)和扩展谱β-内酰胺酶(ESBLs)的流行情况。观察到对氨苄西林(82%)、阿莫西林(68%)、头孢克肟(60%)、诺氟沙星(60%)、萘啶酸(60%)和复方磺胺甲噁唑(53%)的耐药率很高。在 148 株大肠杆菌分离株中,38 株(26%)被确认为 ESBL 产生菌。从高度耐药的 ESBL 产生大肠杆菌分离株中对 ESBL 基因进行测序。使用 MODELLER 9v10 软件进行分子建模,以确定蛋白质的三维结构。这一结果表明,该社区中抗生素耐药性高发的主要原因是先前接触低质量的抗生素,因此大肠杆菌中的 MDR 正在增加。ESBL 是由耐药细菌产生的酶,可水解头孢菌素类抗生素的新一代,导致耐药性,即使是在社区获得性感染的患者中也是如此。因此,我们的结果为了解 ESBL 蛋白的结构和可能的结合位点提供了药物靶向的框架,并且结果被发现是可靠的。

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