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PNist:磁共振成像扫描中丛状神经纤维瘤的交互式容积测量

PNist: interactive volumetric measurements of plexiform neurofibromas in MRI scans.

作者信息

Weizman Lior, Helfer Dina, Ben Bashat Dafna, Pratt Li-Tal, Joskowicz Leo, Constantini Shlomi, Shofty Ben, Ben Sira Liat

机构信息

School of Engineering and Computer Science and The Edmond and Lily Safra Center for Brain Sciences (ELSC), The Hebrew University of Jerusalem, Jerusalem, Israel,

出版信息

Int J Comput Assist Radiol Surg. 2014 Jul;9(4):683-93. doi: 10.1007/s11548-013-0961-0. Epub 2013 Nov 20.

DOI:10.1007/s11548-013-0961-0
PMID:24254804
Abstract

PURPOSE

Volumetric measurements of plexiform neurofibromas (PNs) are time consuming and error prone, as they require the delineation of the PN boundaries, which is mostly impractical in the daily clinical setup. Accurate volumetric measurements are seldom performed for these tumors mainly due to their great dispersion, size and multiple locations. This paper presents a semiautomatic method for segmentation of PN from STIR MRI scans.

METHODS

Plexiform neurofibroma interactive segmentation tool (PNist) is a new tool to segment PNs in STIR MRI scans. The method is based on histogram tumor models computed from a training set.

RESULTS

Experimental results from 28 datasets show an average absolute volume difference of 6.8 % with an average user time of approximately 7 min versus more than 13 min with manual delineation. In complex cases, the PNist user time is less than half in compared to state-of-the-art tools.

CONCLUSIONS

PNist is a new method for the semiautomatic segmentation of PN lesions. Its simplicity and reliability make it unique among other state-of-the-art methods. It has the potential to become a clinical tool that allows the reliable evaluation of PN burden and progression.

摘要

目的

丛状神经纤维瘤(PNs)的体积测量既耗时又容易出错,因为这需要勾勒出PN的边界,而这在日常临床环境中大多不切实际。由于这些肿瘤分布广泛、大小不一且位置多样,很少对其进行精确的体积测量。本文提出了一种从短TI反转恢复(STIR)磁共振成像(MRI)扫描中半自动分割PN的方法。

方法

丛状神经纤维瘤交互式分割工具(PNist)是一种在STIR MRI扫描中分割PN的新工具。该方法基于从训练集中计算出的直方图肿瘤模型。

结果

来自28个数据集的实验结果显示,平均绝对体积差异为6.8%,用户平均用时约7分钟,而手动勾勒边界则需要超过13分钟。在复杂病例中,与现有最先进工具相比,PNist的用户用时不到其一半。

结论

PNist是一种用于PN病变半自动分割的新方法。其简单性和可靠性使其在其他现有最先进方法中独树一帜。它有潜力成为一种能够可靠评估PN负荷和进展情况的临床工具。

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本文引用的文献

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Med Biol Eng Comput. 2012 Aug;50(8):877-84. doi: 10.1007/s11517-012-0929-1. Epub 2012 Jun 16.
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Plexiform neurofibromas in children with neurofibromatosis type 1: frequency and associated clinical deficits.丛状神经纤维瘤在 1 型神经纤维瘤病患儿中的发生频率及相关临床缺陷。
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Tumor burden in patients with neurofibromatosis types 1 and 2 and schwannomatosis: determination on whole-body MR images.
DINs:基于全身 MRI 的 1 型神经纤维瘤病中神经纤维瘤分割的深度交互式网络。
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Image segmentation of plexiform neurofibromas from a deep neural network using multiple b-value diffusion data.基于多 b 值弥散数据的深度神经网络对丛状神经纤维瘤的分割。
Sci Rep. 2020 Oct 20;10(1):17857. doi: 10.1038/s41598-020-74920-1.
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Radiomic biomarkers informative of cancerous transformation in neurofibromatosis-1 plexiform tumors.神经纤维瘤病 1 型丛状肿瘤中具有癌变转化信息的放射组学生物标志物。
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MR diffusion-weighted imaging-based subcutaneous tumour volumetry in a xenografted nude mouse model using 3D Slicer: an accurate and repeatable method.使用3D Slicer在异种移植裸鼠模型中基于磁共振扩散加权成像的皮下肿瘤体积测量:一种准确且可重复的方法。
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1型和2型神经纤维瘤病及神经鞘瘤病患者的肿瘤负荷:基于全身磁共振成像的测定
Radiology. 2009 Mar;250(3):665-73. doi: 10.1148/radiol.2503080700.
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