Research Department, Shriners Hospital for Children, Portland, Oregon, 97239; Department of Biochemistry and Molecular Biology, Oregon Health and Science University, Portland, Oregon, 97239.
Protein Sci. 2014 Jan;23(1):67-75. doi: 10.1002/pro.2391. Epub 2013 Nov 25.
The FK506-binding protein (FKBP) family consists of proteins with a variety of protein-protein interaction domains and versatile cellular functions. It is assumed that all members are peptidyl-prolyl cis-trans isomerases with the enzymatic function attributed to the FKBP domain. Six members of this family localize to the mammalian endoplasmic reticulum (ER). Four of them, FKBP22 (encoded by the FKBP14 gene), FKBP23 (FKBP7), FKBP60 (FKBP9), and FKBP65 (FKBP10), are unique among all FKBPs as they contain the EF-hand motifs. Little is known about the biological roles of these proteins, but emerging genetics studies are attracting great interest to the ER resident FKBPs, as mutations in genes encoding FKBP10 and FKBP14 were shown to cause a variety of matrix disorders. Although the structural organization of the FKBP-type domain as well as of the EF-hand motif has been known for a while, it is difficult to conclude how these structures are combined and how it affects the protein functionality. We have determined a unique 1.9 Å resolution crystal structure for human FKBP22, which can serve as a prototype for other EF hand-containing FKBPs. The EF-hand motifs of two FKBP22 molecules form a dimeric complex with an elongated and predominantly hydrophobic cavity that can potentially be occupied by an aliphatic ligand. The FKBP-type domains are separated by a cleft and their putative active sites can catalyze isomerazation of two bonds within a polypeptide chain in extended conformation. These structural results are of prime interest for understanding biological functions of ER resident FKBPs containing EF-hand motifs.
FK506 结合蛋白(FKBP)家族由具有多种蛋白-蛋白相互作用结构域和多功能细胞功能的蛋白组成。据推测,所有成员都是肽基脯氨酰顺反异构酶,其酶促功能归因于 FKBP 结构域。该家族的六个成员定位于哺乳动物内质网(ER)。其中四个,FKBP22(由 FKBP14 基因编码)、FKBP23(FKBP7)、FKBP60(FKBP9)和 FKBP65(FKBP10),是所有 FKBP 中独一无二的,因为它们含有 EF 手基序。这些蛋白质的生物学功能知之甚少,但新兴的遗传学研究引起了人们对 ER 驻留 FKBP 的极大兴趣,因为编码 FKBP10 和 FKBP14 的基因突变被证明会引起多种基质疾病。尽管 FKBP 型结构域以及 EF 手基序的结构组织已经为人所知了一段时间,但很难得出这些结构是如何组合的以及它如何影响蛋白质功能的结论。我们已经确定了人 FKBP22 的独特的 1.9Å分辨率晶体结构,它可以作为其他含有 EF 手的 FKBP 的原型。两个 FKBP22 分子的 EF 手基序形成一个二聚体复合物,具有拉长的和主要是疏水性的腔,该腔可能被脂族配体占据。FKBP 型结构域由裂缝隔开,它们的潜在活性位点可以在伸展构象中催化多肽链内两个键的异构化。这些结构结果对于理解含有 EF 手基序的 ER 驻留 FKBP 的生物学功能具有首要意义。