Stinchcombe John R, Simonsen Anna K, Blows Mark W
Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, M5S3B2, Canada; Centre for Genome Evolution and Function, University of Toronto, Toronto, Ontario, M5S3B2, Canada.
Evolution. 2014 Apr;68(4):1188-96. doi: 10.1111/evo.12321. Epub 2013 Dec 19.
Predicting the responses to natural selection is one of the key goals of evolutionary biology. Two of the challenges in fulfilling this goal have been the realization that many estimates of natural selection might be highly biased by environmentally induced covariances between traits and fitness, and that many estimated responses to selection do not incorporate or report uncertainty in the estimates. Here we describe the application of a framework that blends the merits of the Robertson-Price Identity approach and the multivariate breeder's equation to address these challenges. The approach allows genetic covariance matrices, selection differentials, selection gradients, and responses to selection to be estimated without environmentally induced bias, direct and indirect selection and responses to selection to be distinguished, and if implemented in a Bayesian-MCMC framework, statistically robust estimates of uncertainty on all of these parameters to be made. We illustrate our approach with a worked example of previously published data. More generally, we suggest that applying both the Robertson-Price Identity and the multivariate breeder's equation will facilitate hypothesis testing about natural selection, genetic constraints, and evolutionary responses.
预测对自然选择的响应是进化生物学的关键目标之一。实现这一目标面临的两大挑战是,人们意识到许多自然选择的估计可能因性状与适合度之间环境诱导的协方差而存在高度偏差,而且许多估计的选择响应并未纳入或报告估计中的不确定性。在此,我们描述了一个融合罗伯逊 - 普赖斯恒等式方法和多变量育种者方程优点的框架的应用,以应对这些挑战。该方法能够在无环境诱导偏差的情况下估计遗传协方差矩阵、选择差、选择梯度和选择响应,区分直接和间接选择以及选择响应,并且如果在贝叶斯 - MCMC框架中实施,还能对所有这些参数的不确定性进行统计稳健的估计。我们用一个已发表数据的实例来说明我们的方法。更一般地说,我们建议同时应用罗伯逊 - 普赖斯恒等式和多变量育种者方程将有助于对自然选择、遗传限制和进化响应进行假设检验。