Suppr超能文献

来源于日本江蓠(杉藻目,褐藻门)的海藻糖-6-磷酸合酶基因。

A trehalose-6-phosphate synthase gene from Saccharina japonica (Laminariales, Phaeophyceae).

机构信息

Chinese Academy of Sciences, Institute of Oceanology, Qingdao, 266071, China,

出版信息

Mol Biol Rep. 2014 Jan;41(1):529-36. doi: 10.1007/s11033-013-2888-5. Epub 2013 Nov 30.

Abstract

The full-length cDNA sequence of a trehalose-6-phosphate synthase gene from Saccharina japonica (designated as SjaTPS) (Accession: KC578568) was isolated based on homologous cloning and RACE-PCR. It was 4,127 bp, with 320 bp 5'-UTR, 21 bp 3'-UTR, and open reading frame (ORF) of 3,786 bp. The deduced 1,261 amino acids characterized with predicted molecular weight of 137.84 kDa and theoretical isoelectric point of 7.12. The SjaTPS had one N-terminal CBM20 (family 20 carbohydrate-binding module) domain, one TPS domain (trehalose-6-phosphate synthase) in the middle region and a single TPP (trehalose-6-phosphate phosphatase) domain near the C-terminus. Structural analysis suggested that the SjaTPS putatively functioned as trehalose-6-phosphate synthase, and might be related to laminaran metabolism in S. japonica. Homology analysis indicated that the SjaTPS shared 49-70 % similarities with the 13 known TPS sequences of other algae; only 55 % amino acid similarities were detected between SjaTPS and the previously reported TPS sequence of S. japonica (Accession: DQ666325). Phylogenetic analysis revealed close affinity between SjaTPS and TPS of brown alga Ectocarpus siliculosus (Accession: CBJ29609). Transcriptional analysis showed that desiccation greatly enhanced SjaTPS expression and the maximum appeared at 3 h, which was about 300-fold compared to that of the start, implied that SjaTPS was involved with drought adaption in kelp. In vitro expression of SjaTPS showed that one distinct band existed at ~115 kDa, and western blot detection proved that it was positive to the anti-His antibody with high specificity. Our results increased the knowledge of trehalose-6-phosphate synthase properties in S. japonica and also important for better understanding the role trehalose plays in kelp abiotic tolerance for adaption to the sublittoral habitats.

摘要

从裙带菜(Saccharina japonica)中基于同源克隆和 RACE-PCR 分离得到全长 cDNA 序列的海藻糖-6-磷酸合酶基因(命名为 SjaTPS)(登录号:KC578568)。它长 4127bp,5'-UTR 长 320bp,3'-UTR 长 21bp,开放阅读框(ORF)长 3786bp。推断的 1261 个氨基酸具有预测的分子量为 137.84kDa 和理论等电点为 7.12。SjaTPS 具有一个 N 端 CBM20(家族 20 碳水化合物结合模块)结构域,一个位于中间区域的 TPS 结构域(海藻糖-6-磷酸合酶)和一个靠近 C 端的单个 TPP(海藻糖-6-磷酸磷酸酶)结构域。结构分析表明,SjaTPS 可能作为海藻糖-6-磷酸合酶发挥作用,可能与裙带菜中的 laminaran 代谢有关。同源性分析表明,SjaTPS 与其他 13 种藻类的 13 种已知 TPS 序列具有 49-70%的相似性;SjaTPS 与之前报道的裙带菜 TPS 序列(登录号:DQ666325)之间仅检测到 55%的氨基酸相似性。系统发育分析表明,SjaTPS 与褐藻 Ectocarpus siliculosus 的 TPS 具有密切的亲缘关系(登录号:CBJ29609)。转录分析表明,干燥极大地增强了 SjaTPS 的表达,最大表达出现在 3h,与起始时相比约增加了 300 倍,这表明 SjaTPS 参与了海带的干旱适应。SjaTPS 的体外表达显示出约 115kDa 的一个明显条带,Western blot 检测证明它与抗 His 抗体呈阳性反应,具有高度特异性。我们的研究结果增加了对裙带菜海藻糖-6-磷酸合酶特性的认识,也为更好地理解海藻糖在海带非生物胁迫耐受性中的作用以及适应潮下带生境提供了重要信息。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验