Suppr超能文献

南极菌株海藻糖的克隆、表达分析及冷冻保存研究

Cloning and expression analysis of , and cryopreservation research of trehalose from Antarctic strain sp.

作者信息

Yin Hua, Wang Yibin, He Yingying, Xing Lei, Zhang Xiufang, Wang Shuai, Qi Xiaoqing, Zheng Zhou, Lu Jian, Miao Jinlai

机构信息

State Key Laboratory of Biological Fermentation Engineering of Beer, Tsingtao Brewery Co. Ltd, Qingdao, 266061 China.

The First Institute of Oceanography, State Oceanic Administration, Qingdao, 266061 China.

出版信息

3 Biotech. 2017 Oct;7(5):343. doi: 10.1007/s13205-017-0983-3. Epub 2017 Sep 22.

Abstract

Trehalose is a non-reducing disaccharide sugar that widely exists in a variety of organisms, such as bacteria and eukaryotes except the vertebrates. It plays an important role in a number of critical metabolic functions especially in response to stressful environmental conditions. However, the biosynthetic pathways of trehalose in cold-adapted yeast and its responses to temperature and salinity changes remain little understood. In this study, the genome of Antarctic-isolated sp. NJ7 was generated from which we identified the gene coding for trehalose phosphate synthase (TPS1) and trehalose phosphate phosphatase (TPS2), the two enzymes most critical for trehalose production. The whole draft genome length of sp. NJ7 was 18,021,233 bp, and encoded at least 34 rRNA operons and 72 tRNAs. The open reading frame of contained 1827 nucleotide encoding 608 amino acids with a molecular weight of 67.64 kDa, and an isoelectric point of 5.54, while contained 3948 nucleotide encoding 1315 amino acids with a molecular weight of 144.47 kDa and an isoelectric point of 6.36. The TPS1 and TPS2 protein sequences were highly homologous to T-34, but TPS2 had obvious specificity and differently with others which suggest species specificity and different evolutionary history. Expression level of gene was strongly influenced by temperature and high salinity. In addition, addition of 0.5% trehalose preserved yeast cells in the short term but was not effective for cryopreservation for more than 5 days, but still suggesting that exogenous trehalose could indeed significantly improve the survival of yeast cells under freezing conditions. Our results provided new insights on the molecular basis of cold adaptations of Antarctic sp., and also generated new information on the roles trehalose play in yeast tolerance to extreme conditions in the extreme Antarctic environments.

摘要

海藻糖是一种非还原性二糖,广泛存在于多种生物体中,如细菌和除脊椎动物外的真核生物。它在许多关键的代谢功能中发挥着重要作用,尤其是在应对压力环境条件时。然而,冷适应酵母中海藻糖的生物合成途径及其对温度和盐度变化的反应仍知之甚少。在本研究中,我们获得了南极分离菌株NJ7的基因组,从中鉴定出编码海藻糖磷酸合酶(TPS1)和海藻糖磷酸磷酸酶(TPS2)的基因,这两种酶是海藻糖产生的最关键酶。菌株NJ7的全基因组草图长度为18,021,233 bp,编码至少34个rRNA操纵子和72个tRNA。TPS1的开放阅读框包含1827个核苷酸,编码608个氨基酸,分子量为67.64 kDa,等电点为5.54,而TPS2包含3948个核苷酸,编码1315个氨基酸,分子量为144.47 kDa,等电点为6.36。TPS1和TPS2的蛋白质序列与菌株T-34高度同源,但TPS2具有明显的特异性,与其他序列不同,这表明物种特异性和不同的进化历史。TPS1基因的表达水平受温度和高盐度的强烈影响。此外,添加0.5%的海藻糖在短期内可保存酵母细胞,但对超过5天的冷冻保存无效,但仍表明外源海藻糖确实可以显著提高酵母细胞在冷冻条件下的存活率。我们的结果为南极菌株冷适应的分子基础提供了新的见解,也为海藻糖在极端南极环境中酵母耐受极端条件的作用提供了新的信息。

相似文献

4
Metabolic Changes of Induced by Gene Deletion.基因缺失诱导的代谢变化。
J Proteome Res. 2019 Sep 6;18(9):3317-3327. doi: 10.1021/acs.jproteome.9b00259. Epub 2019 Aug 26.

引用本文的文献

本文引用的文献

5
eggNOG v4.0: nested orthology inference across 3686 organisms.eggNOG v4.0:跨越 3686 个生物体的嵌套同源推断。
Nucleic Acids Res. 2014 Jan;42(Database issue):D231-9. doi: 10.1093/nar/gkt1253. Epub 2013 Dec 1.
7
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
Mol Biol Evol. 2013 Dec;30(12):2725-9. doi: 10.1093/molbev/mst197. Epub 2013 Oct 16.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验