Vermaas Josh V, Tajkhorshid Emad
Center for Biophysics and Computational Biology, Department Biochemistry, College of Medicine, and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
J Phys Chem B. 2014 Feb 20;118(7):1754-64. doi: 10.1021/jp409854w. Epub 2013 Dec 16.
Understanding the process of membrane insertion is an essential step in developing a detailed mechanism, for example, for peripheral membrane protein association and membrane fusion. The highly mobile membrane mimetic (HMMM) has been used to accelerate the membrane association and binding of peripheral membrane proteins in simulations by increasing the lateral diffusion of phospholipid headgroups while retaining an atomistic description of the interface. Through a comparative study, we assess the difference in insertion rate of a free phospholipid into an HMMM as well as into a conventional phospholipid bilayer and develop a detailed mechanistic model of free phospholipid insertion into biological membranes. The mechanistic insertion model shows that successful irreversible association of the free phospholipid to the membrane interface, which results in its insertion, is the rate-limiting step. Association is followed by independent, sequential insertion of the acyl tails of the free phospholipid into the membrane, with splayed acyl tail intermediates. Use of the HMMM is found to replicate the same intermediate insertion states as in the full phospholipid bilayer; however, it accelerates overall insertion by approximately a factor of 3, with the probability of successful association of phospholipid to the membrane being significantly enhanced.
了解膜插入过程是建立详细机制(例如用于外周膜蛋白结合和膜融合)的关键步骤。高流动性膜模拟物(HMMM)已被用于在模拟中加速外周膜蛋白的膜结合,通过增加磷脂头部基团的横向扩散,同时保留界面的原子描述。通过一项比较研究,我们评估了游离磷脂插入HMMM以及传统磷脂双分子层的速率差异,并建立了游离磷脂插入生物膜的详细机制模型。该机制插入模型表明,游离磷脂与膜界面成功的不可逆结合(导致其插入)是限速步骤。结合之后是游离磷脂的酰基尾部独立、顺序地插入膜中,形成展开的酰基尾部中间体。发现使用HMMM可复制与完整磷脂双分子层相同的中间插入状态;然而,它将整体插入速度提高了约3倍,磷脂与膜成功结合的概率显著增强。