Environmental Biotechnology Lab, The University of Hong Kong, Hong Kong SAR, China.
Environ Microbiol. 2014 Aug;16(8):2421-32. doi: 10.1111/1462-2920.12355. Epub 2014 Jan 13.
Activated sludge (AS), which has been in use for 100 years, has been the most popular biological process in various wastewater treatment plants (WWTPs), in which bacteria plays central roles in pollutant removal. However, the potential relationship between bacteria taxa and the niches occupied by specific functional bacteria in AS are largely unknown. Here, correlation-based network analysis was applied to a 16S rRNA gene pyrosequencing dataset containing > 760 000 sequences of 50 AS samples from globally distributed full-scale WWTPs. The results showed that (i) bacterial assembly in AS was nonrandomly arranged by taxonomic relatedness and (ii) intra- and inter-phylum/class co-occurrence higher than expected by chance was induced by multiple deterministic processes, such as habitat filtering and competition. Moreover, based on bacterial occupancy, a prevalent core set of cosmopolitan functional bacteria (e.g. multiple nitrogen-cycling-related bacteria) was widely distributed in the AS of different WWTPs, showing strong ecological associations among them. Additionally, the AS network has statistical and structural characteristics similar to those of previously reported ecological networks, such as power-law connectivity distribution and nonrandomly connected properties. Overall, this work provides novel insights into the bacterial associations within AS and sheds light on the ecological rules guiding bacterial assembly in WWTPs.
活性污泥(AS)已经使用了 100 年,是各种污水处理厂(WWTP)中最受欢迎的生物处理工艺,其中细菌在污染物去除中起着核心作用。然而,AS 中细菌分类群与特定功能细菌占据的生态位之间的潜在关系在很大程度上尚不清楚。在这里,基于相关性的网络分析应用于包含来自全球分布的全规模 WWTP 的 50 个 AS 样本的 >760,000 个序列的 16S rRNA 基因焦磷酸测序数据集。结果表明:(i)AS 中的细菌组装是由分类相关关系非随机排列的;(ii)种内和种间门类/类群的共现高于预期,这是由多种确定性过程引起的,如栖息地过滤和竞争。此外,基于细菌占据度,广泛分布于不同 WWTP 的 AS 中存在一个流行的普遍功能细菌核心集(例如,多种氮循环相关细菌),它们之间表现出强烈的生态关联。此外,AS 网络具有与先前报道的生态网络相似的统计和结构特征,例如幂律连接分布和非随机连接特性。总体而言,这项工作为 AS 中细菌之间的关联提供了新的见解,并阐明了指导 WWTP 中细菌组装的生态规则。