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DNA复制起始的表观遗传格局

Epigenetic landscape for initiation of DNA replication.

作者信息

Sherstyuk Vladimir V, Shevchenko Alexander I, Zakian Suren M

机构信息

Russian Academy of Sciences, Siberian Branch, Institute of Cytology and Genetics, pr. Akad. Lavrentieva 10, Novosibirsk, 630090, Russia.

出版信息

Chromosoma. 2014 Jun;123(3):183-99. doi: 10.1007/s00412-013-0448-3. Epub 2013 Dec 17.

DOI:10.1007/s00412-013-0448-3
PMID:24337246
Abstract

The key genetic process of DNA replication is initiated at specific sites referred to as replication origins. In eukaryotes, origins of DNA replication are not specified by a defined nucleotide sequence. Recent studies have shown that the structural context and topology of DNA sequence, chromatin features, and its transcriptional activity play an important role in origin choice. During differentiation and development, significant changes in chromatin organization and transcription occur, influencing origin activity and choice. In the last few years, a number of different genome-wide studies have broadened the understanding of replication origin regulation. In this review, we discuss the epigenetic factors and mechanisms that modulate origin choice and firing.

摘要

DNA复制的关键遗传过程始于被称为复制起点的特定位点。在真核生物中,DNA复制起点并非由特定的核苷酸序列所确定。最近的研究表明,DNA序列的结构背景和拓扑结构、染色质特征及其转录活性在起点选择中起着重要作用。在分化和发育过程中,染色质组织和转录会发生显著变化,影响起点活性和选择。在过去几年中,一些不同的全基因组研究拓宽了我们对复制起点调控的理解。在这篇综述中,我们讨论了调节起点选择和起始的表观遗传因素和机制。

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2
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本文引用的文献

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Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins.人基因组的泡式测序分析揭示了调控早期和晚期起始子的不同染色质介导的机制。
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DNA replication timing.DNA 复制时间。
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[Regulation of DNA replication timing].[DNA复制时间的调控]
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Repair of UV-induced DNA lesions in natural Saccharomyces cerevisiae telomeres is moderated by Sir2 and Sir3, and inhibited by yKu-Sir4 interaction.天然酿酒酵母端粒中紫外线诱导的DNA损伤修复受Sir2和Sir3调控,并受yKu-Sir4相互作用抑制。
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Temporal association of ORCA/LRWD1 to late-firing origins during G1 dictates heterochromatin replication and organization.在G1期,ORCA/LRWD1与晚期激活的复制起点的时间关联决定了异染色质的复制和组织。
Nucleic Acids Res. 2017 Mar 17;45(5):2490-2502. doi: 10.1093/nar/gkw1211.
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Order from clutter: selective interactions at mammalian replication origins.从混乱中梳理秩序:哺乳动物复制起点处的选择性相互作用
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The Replicative Consequences of Papillomavirus E2 Protein Binding to the Origin Replication Factor ORC2.乳头瘤病毒E2蛋白与复制起始因子ORC2结合的复制后果
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Dynamic regulation of histone H3K9 is linked to the switch between replication and transcription at the Dbf4 origin-promoter locus.组蛋白H3K9的动态调控与Dbf4起始子-启动子位点处复制和转录之间的转换相关联。
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Replication origins: determinants or consequences of nuclear organization?复制起点:核组织的决定因素还是结果?
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The role of PR-Set7 in replication licensing depends on Suv4-20h.PR-Set7 在复制许可中的作用依赖于 Suv4-20h。
Genes Dev. 2012 Dec 1;26(23):2580-9. doi: 10.1101/gad.195636.112. Epub 2012 Nov 14.
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The histone acetyltransferases CBP and Chameau integrate developmental and DNA replication programs in Drosophila ovarian follicle cells.组蛋白乙酰转移酶 CBP 和 Chameau 在果蝇卵巢滤泡细胞中整合发育和 DNA 复制程序。
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The epigenetic control of E-box and Myc-dependent chromatin modifications regulate the licensing of lamin B2 origin during cell cycle.E 盒和 Myc 依赖性染色质修饰的表观遗传控制调节了 lamin B2 起始点在细胞周期中的许可。
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Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.解析与 G-四链体共识基序相关的具有细胞类型特异性和可重编程性的人类复制起始点特征。
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