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比较日本蜘蛛兰和白边蜘蛛兰(天门冬科)的系统地理学研究。

Comparative phylogeographic study of Hosta sieboldiana and Hosta albomarginata (Asparagaceae) in Japan.

机构信息

Botanical Gardens, Tohoku University Kawauchi 12-2, Aoba-ku, Sendai, 980-0862, Japan.

出版信息

Ecol Evol. 2013 Nov;3(14):4767-85. doi: 10.1002/ece3.838. Epub 2013 Oct 31.

Abstract

We analyzed variations in chloroplast DNA (cpDNA) in the widespread herbaceous species Hosta sieboldiana and Hosta albomarginata across large portions of their geographic ranges in the Japanese archipelago. Our objective was to compare the phylogeographic histories and phylogeographic structures of the two congeneric species in the Japanese archipelago. The location of the study is Japanese archipelago. We sequenced 1380 bp of noncoding cpDNA from 45 populations of H. sieboldiana (n = 362) and 55 populations of H. albomarginata (n = 436) to assess genetic variations within and among populations across almost the entire distributions of the species in Japan. Extant patterns of geographic structure were analyzed using statistical parsimony networks and spatial analysis of molecular variance (SAMOVA). We also used Monmonier's algorithm to detect genetic barriers between regions. Relationships between the populations were examined using a neighbor-joining (NJ) method. Four haplotypes were found for H. sieboldiana, whereas eight haplotypes were identified for H. albomarginata. Total genetic haplotype diversity (hT) and within-population haplotype diversity (hS) for H. sieboldiana were 0.352 and 0.040, respectively, while the values for H. albomarginata were 0.529 and 0.085, respectively. The population differentiations (GST) for H. sieboldiana and H. albomarginata were 0.839 and 0.886, respectively. The SAMOVA analysis revealed two clusters in H. sieboldiana and four clusters in H. albomarginata. Differentiations between and among the clusters were supported by the BARRIER analysis and the NJ tree. We detected differences in the population genetic structure between the two species. We found that H. sieboldiana had lower haplotype diversity than H. albomarginata. These results may be partially explained by the difference in ecological habitats and geographic distributions between the species. Hosta albomarginata is more widely distributed than H. sieboldiana in East Asia including Russia, and this large distribution range would enable more chances to intraspecific gene flow.

摘要

我们分析了日本群岛广泛分布的草本植物萱草属(Hosta)中萱草(Hosta sieboldiana)和白边萱草(Hosta albomarginata)的叶绿体 DNA(cpDNA)变异。我们的目标是比较这两个同属物种在日本群岛的系统地理学历史和系统地理学结构。研究地点在日本群岛。我们对来自日本群岛几乎整个分布区域的 45 个萱草属种群(n = 362)的 362 个个体和 55 个白边萱草种群(n = 436)的 1380 bp 非编码 cpDNA 进行了测序,以评估种群内和种群间的遗传变异。通过统计简约网络和分子方差空间分析(SAMOVA)分析现存的地理结构模式。我们还使用 Monmonier 算法检测区域间的遗传障碍。使用邻接法(NJ)方法分析种群间的关系。发现萱草属有 4 种单倍型,而白边萱草属有 8 种单倍型。萱草属的总遗传单倍型多样性(hT)和种群内单倍型多样性(hS)分别为 0.352 和 0.040,而白边萱草属的相应值分别为 0.529 和 0.085。萱草属和白边萱草属的种群分化(GST)分别为 0.839 和 0.886。SAMOVA 分析表明,萱草属有 2 个聚类,白边萱草属有 4 个聚类。BARRIER 分析和 NJ 树支持聚类间和聚类内的分化。我们检测到这两个物种之间种群遗传结构的差异。我们发现萱草属的单倍型多样性低于白边萱草属。这些结果可能部分归因于两个物种生态生境和地理分布的差异。白边萱草属在东亚包括俄罗斯的分布范围比萱草属更广,这种广泛的分布范围使种内基因流动的机会更多。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2d03/3867910/eaeecead09e8/ece30003-4767-f1.jpg

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