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基于叶绿体 DNA 序列变异的东亚木姜子(樟科)的系统地理学和遗传多样性。

Phylogeography and genetic diversity of East Asian Neolitsea sericea (Lauraceae) based on variations in chloroplast DNA sequences.

机构信息

Department of Biological Sciences, Inha University, Incheon 402-751, Republic of Korea.

出版信息

J Plant Res. 2013 Mar;126(2):193-202. doi: 10.1007/s10265-012-0519-1. Epub 2012 Sep 19.

Abstract

Neolitsea sericea is an evergreen broad leaved tree in the warm-temperate regions of East Asia. This area is a hotspot for plant species richness and endemism caused by dynamic changes in land configuration during the Quaternary. However, the historical migration of such evergreen tree species is still poorly understood. In an attempt to reconstruct the phylogeographic history of N. sericea during the Quaternary, we identified the chloroplast DNA haplotypes of 287 individuals from 33 populations covering almost all of its geographic range. Analyses were based on sequence data from the trnL-F, psbC-trnS, and rps16 regions. Nine haplotypes were identified. The majority included ancestral types in the southwestern part of the main islands of Japan, with other region-specific haplotypes being found in populations on the Korean Peninsula, Taiwan (Isl. Lanyu), and elsewhere in Japan. A statistical parsimony network revealed two lineages derived from Japanese main islands. One was represented on the Korean Peninsula, the other on Isl. Lanyu. The current distribution of N. sericea has been shaped by colonization via land bridges. During the glacial periods, two primary, but separate migration routes were followed--from the southwestern part of the Japanese main islands to either the Korean Peninsula or Taiwan. In addition, we believe the Zhoushan populations were shaped by post-glacial processes through an ECS land bridge (East China Sea basin) from northern refugia that existed during the late Pleistocene.

摘要

木姜子是东亚暖温带地区的一种常绿阔叶树。该地区是第四纪时期由于陆地构造动态变化而导致植物物种丰富度和特有性的热点地区。然而,此类常绿树种的历史迁移仍知之甚少。为了重建木姜子在第四纪的系统地理历史,我们从几乎涵盖其地理范围的 33 个种群中鉴定了 287 个个体的叶绿体 DNA 单倍型。分析基于 trnL-F、psbC-trnS 和 rps16 区域的序列数据。确定了 9 种单倍型。大多数包括日本主岛西南部的祖先类型,其他地区特有的单倍型存在于朝鲜半岛、台湾(兰屿岛)和日本其他地区的种群中。统计简约网络揭示了两个来自日本主岛的谱系。一个存在于朝鲜半岛,另一个存在于兰屿岛。木姜子的当前分布是通过陆桥的殖民形成的。在冰河时期,有两条主要的但分开的迁移路线——从日本主岛的西南部到朝鲜半岛或台湾。此外,我们认为舟山种群是通过晚更新世存在的东海盆地 ECS 陆桥(东海盆地)的冰后期过程塑造的。

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