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砷暴露对低暴露美国人群血液甲基组的影响。

Blood methylomics in response to arsenic exposure in a low-exposed US population.

机构信息

1] Mary Ann and J. Milburn Smith Child Health Research Program, Ann and Robert H. Lurie Children's Hospital of Chicago Research Center, Department of Pediatrics, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA [2] Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.

Driskill Graduate Program (DGP) in Life Sciences, Northwestern University Biomedical Informatics Center (NUBIC), Northwestern University Clinical and Translational Sciences Institute (NUCATS), Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.

出版信息

J Expo Sci Environ Epidemiol. 2014 Mar-Apr;24(2):145-9. doi: 10.1038/jes.2013.89. Epub 2013 Dec 25.

Abstract

Exposure to arsenic (As) has been associated with a number of diseases such as cancers, cardiovascular diseases (CVD), and neurological disorders. To explore the possible underlying epigenetic mechanisms, a nested case-control study was conducted within the Coronary Artery Risk Development in Young Adults (CARDIA) study by randomly selecting 46 non-smoker and non-diabetic White participants with low (N=23) and high (N=23) As exposure based on toenail total As measures at examination year 2. We conducted methylomic profiling of white blood cell (WBC) DNA collected at examination year 15 using the Illumina HumanMethylation450 BeadChip, and performed association tests using multiple linear regression models adjusting for age, sex, and estimated WBC proportions. We observed 22 CpG sites with methylation levels associated with high As exposure at a nominal significance level of 10(-4). However, the statistical significance disappeared after correction for multiple testing. Some genes annotated by these 22 CpG sites are known to be involved in As-associated diseases. Replication in larger samples of individuals with low levels of As exposure will be required.

摘要

砷(As)暴露与许多疾病有关,如癌症、心血管疾病(CVD)和神经紊乱。为了探索可能的潜在表观遗传机制,在年轻人冠状动脉风险发展(CARDIA)研究中,通过随机选择基于第 2 年检查时脚趾甲总砷测量的低(N=23)和高(N=23)砷暴露的 46 名不吸烟和非糖尿病的白人参与者,进行了嵌套病例对照研究。我们在第 15 年检查时使用 Illumina HumanMethylation450 BeadChip 对白细胞(WBC)DNA 进行了甲基组谱分析,并使用多元线性回归模型进行了关联测试,该模型调整了年龄、性别和估计的 WBC 比例。我们观察到 22 个 CpG 位点的甲基化水平与高砷暴露相关,在名义显著性水平为 10(-4)时有统计学意义。然而,在进行多次测试校正后,统计学意义消失了。这些 22 个 CpG 位点注释的一些基因已知与砷相关疾病有关。需要在暴露水平较低的个体的更大样本中进行复制。

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