Georges Anouk, Cambisano Nadine, Ahariz Naïma, Karim Latifa, Georges Michel
Department of Ophtalmology, Faculty of Medicine, University of Liège (CHU), Liège, Belgium.
Unit of Animal Genomics, GIGA-R & Faculty of Veterinary Medicine, University of Liège (B34), Liège, Belgium.
PLoS One. 2013 Dec 23;8(12):e83574. doi: 10.1371/journal.pone.0083574. eCollection 2013.
A genome-wide linkage scan was conducted in a Northern-European multigenerational pedigree with nine of 40 related members affected with concomitant strabismus. Twenty-seven members of the pedigree including all affected individuals were genotyped using a SNP array interrogating > 300,000 common SNPs. We conducted parametric and non-parametric linkage analyses assuming segregation of an autosomal dominant mutation, yet allowing for incomplete penetrance and phenocopies. We detected two chromosome regions with near-suggestive evidence for linkage, respectively on chromosomes 8 and 18. The chromosome 8 linkage implied a penetrance of 0.80 and a rate of phenocopy of 0.11, while the chromosome 18 linkage implied a penetrance of 0.64 and a rate of phenocopy of 0. Our analysis excludes a simple genetic determinism of strabismus in this pedigree.
在一个北欧多代家系中进行了全基因组连锁扫描,该家系40名相关成员中有9名患有伴发性斜视。使用一个检测超过30万个常见单核苷酸多态性(SNP)的SNP阵列对包括所有患病个体在内的27名家系成员进行了基因分型。我们进行了参数和非参数连锁分析,假设常染色体显性突变的分离,但允许不完全外显率和拟表型存在。我们分别在8号和18号染色体上检测到两个有接近提示性连锁证据的染色体区域。8号染色体的连锁表明外显率为0.80,拟表型率为0.11,而18号染色体的连锁表明外显率为0.64,拟表型率为0。我们的分析排除了该家系中斜视的简单遗传决定性因素。