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四斑团水虱(等足目:团水虱科)的完整线粒体基因组

The complete mitochondrial genome of Limnoria quadripunctata Holthuis (Isopoda: Limnoriidae).

作者信息

Lloyd Rhiannon E, Streeter Simon D, Foster Peter G, Littlewood D Timothy J, Huntley Jim, Beckham Gregg T, Himmel Michael E, Cragg Simon M

机构信息

a Institute of Biomedical and Biomolecular Sciences, University of Portsmouth , Portsmouth , UK .

b School of Biological Sciences, University of Portsmouth , Portsmouth , UK .

出版信息

Mitochondrial DNA. 2015;26(6):825-6. doi: 10.3109/19401736.2013.855912. Epub 2014 Jan 10.

Abstract

The complete mitochondrial genome of Limnoria quadripunctata, a marine wood-eating isopod crustacean, was determined from whole genome sequence data. The mitogenome is 16,503 bp in length and contains 39 genes: 13 protein-coding, 2 ribosomal RNA, 22 tRNA, two of which are repeated and a control region. The start codon most commonly used by the Limnoria protein-coding genes is ATN, as is the case in the two other available complete isopod mitogenomes. The gene arrangement differs among these complete isopod mitogenomes, as does the AT-content of H-strand protein-coding genes. The latter observations, coupled with the considerable nucleotide diversity observed between the isopod mitogenomes, support the idea that each isopod species belongs to a distinct lineage as implied by their current placement in separate suborders.

摘要

从全基因组序列数据中确定了海洋食木等足类甲壳动物四斑团水虱的完整线粒体基因组。该线粒体基因组长度为16,503 bp,包含39个基因:13个蛋白质编码基因、2个核糖体RNA基因、22个tRNA基因(其中两个是重复的)以及一个控制区。四斑团水虱蛋白质编码基因最常用的起始密码子是ATN,另外两个已有的完整等足类线粒体基因组也是如此。这些完整的等足类线粒体基因组之间的基因排列不同,H链蛋白质编码基因的AT含量也不同。后一观察结果,再加上等足类线粒体基因组之间观察到的相当大的核苷酸多样性,支持了这样一种观点,即每个等足类物种都属于一个独特的谱系,正如它们目前在不同亚目中的分类所暗示的那样。

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