Agricultural Microbiology Division, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Republic of Korea.
Department of Microbiology, Dankook University, Anseo-dong, Cheonan 330-714, Republic of Korea.
Int J Syst Evol Microbiol. 2014 Mar;64(Pt 3):926-932. doi: 10.1099/ijs.0.055269-0. Epub 2013 Dec 18.
Two strains, designated 5413J-26(T) and KIS18-15(T), were isolated from the air and forest soil, respectively, in South Korea. Cells of the two strains were Gram-stain-negative, aerobic, polar-flagellated and rod-shaped. According to the phylogenetic tree, strains 5413J-26(T) and KIS18-15(T) fell into the cluster of Sphingomonas sensu stricto. Strain 5413J-26(T) showed the highest sequence similarities with Sphingomonas trueperi LMG 2142(T) (96.6%), Sphingomonas molluscorum KMM 3882(T) (96.5%), Sphingomonas azotifigens NBRC 15497(T) (96.3 %) and Sphingomonas pituitosa EDIV(T) (96.1 %), while strain KIS18-15(T) had the highest sequence similarity with Sphingomonas soli T5-04(T) (96.8%), Sphingomonas pituitosa EDIV(T) (96.6%), Sphingomonas leidyi ATCC 15260(T) (96.6 %), Sphingomonas asaccharolytica NBRC 15499(T) (96.6 %) and Sphingomonas koreensis JSS26(T) (96.6 %). The 16S rRNA gene sequence similarity between strains 5413J-26(T) and KIS18-15(T) was 95.4 %. Ubiquinone 10 was the predominant respiratory quinone and homospermidine was the major polyamine. The major polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and several unidentified phospholipids and lipids. The main cellular fatty acids (>10% of the total fatty acids) of strain 5413J-26(T) were summed feature 8 (C18 : 1ω6c and/or C18 : 1ω7c), summed feature 3 (C16 : 1ω7c and/or iso-C15 : 0 2-OH) and C14 : 0 2-OH, and those of strain KIS18-15(T) were summed feature 8 and C16 : 0. Based on the results of 16S rRNA gene sequence analysis, and physiological and biochemical characterization, two novel species with the suggested names Sphingomonas aerophila sp. nov. (type strain 5413J-26(T) = KACC 16533(T) = NBRC 108942(T)) and Sphingomonas naasensis sp. nov. (type strain KIS18-15(T) = KACC 16534(T) = NBRC 108943(T)) are proposed.
两株菌株,分别命名为 5413J-26(T) 和 KIS18-15(T),分别从韩国的空气和森林土壤中分离得到。两株菌的细胞革兰氏染色阴性,需氧,极生鞭毛,呈杆状。根据系统发育树,菌株 5413J-26(T)和 KIS18-15(T)属于严格的鞘氨醇单胞菌属。菌株 5413J-26(T)与 Sphingomonas trueperi LMG 2142(T) (96.6%)、Sphingomonas molluscorum KMM 3882(T) (96.5%)、Sphingomonas azotifigens NBRC 15497(T) (96.3%)和 Sphingomonas pituitosa EDIV(T) (96.1%)的序列相似度最高,而菌株 KIS18-15(T)与 Sphingomonas soli T5-04(T) (96.8%)、Sphingomonas pituitosa EDIV(T) (96.6%)、Sphingomonas leidyi ATCC 15260(T) (96.6%)、Sphingomonas asaccharolytica NBRC 15499(T) (96.6%)和 Sphingomonas koreensis JSS26(T) (96.6%)的序列相似度最高。菌株 5413J-26(T)和 KIS18-15(T)的 16S rRNA 基因序列相似度为 95.4%。泛醌 10 是主要的呼吸醌,腐胺是主要的多胺。主要的极性脂由双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺和几种未鉴定的磷脂和脂类组成。菌株 5413J-26(T)的主要细胞脂肪酸(占总脂肪酸的 10%以上)为特征 8(C18:1ω6c 和/或 C18:1ω7c)、特征 3(C16:1ω7c 和/或 iso-C15:0 2-OH)和 C14:0 2-OH,而菌株 KIS18-15(T)的主要细胞脂肪酸为特征 8 和 C16:0。基于 16S rRNA 基因序列分析和生理生化特征,提出了两个新种,建议命名为 Aerophila aerophila sp. nov.(模式株 5413J-26(T) = KACC 16533(T) = NBRC 108942(T))和 Sphingomonas naasensis sp. nov.(模式株 KIS18-15(T) = KACC 16534(T) = NBRC 108943(T))。