Huang Yao, Wei Ziyan, Danzeng Wangmu, Kim Myong Chol, Zhu Guoxin, Zhang Yumin, Liu Zuobing, Peng Fang
China Center for Type Culture Collection (CCTCC), College of Life Sciences, Wuhan University, Wuhan 430072, PR China.
College of Life Sciences, Kim II Sung University, Pyongyang, DPR of Korea.
Int J Syst Evol Microbiol. 2017 Oct;67(10):4064-4068. doi: 10.1099/ijsem.0.002253. Epub 2017 Sep 21.
Strain 200, isolated from a soil sample taken from Antarctic tundra soil around Zhongshan Station, was found to be a Gram-stain-negative, yellow-pigmented, catalase-positive, oxidase-negative, non-motile, non-spore-forming, rod-shaped and aerobic bacterium. Strain 200 grew optimally at pH 7.0 and in the absence of NaCl on R2A. Its optimum growth temperature was 20 °C. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain 200 belonged to the genus Sphingomonas. Strain 200 showed the highest sequence similarities to Sphingomonas kyeonggiense THG-DT81 (95.1 %) and Sphingomonas molluscorum KMM 3882 (95.1 %). Chemotaxonomic analysis showed that strain 200 had characteristics typical of members of the genus Sphingomonas. Ubiquinone 10 was the predominant respiratory quinone and sym-homospermidine was the polyamine. The major polar lipids were sphingoglycolipid, phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and phosphatidylcholine. The G+C content of the genomic DNA was determined to be 60.9 mol%. Strain 200 contained C16 : 0 (31.6 %), summed feature 8 (comprising C18 : 1ω7c and/or C18 : 1ω6c, 22.7 %), summed feature 3 (comprising C16 : 1ω7c and/or C16 : 1ω6c, 11.2 %), C18 : 0 (7.8 %) and C14 : 0 2OH (6.7 %) as the major cellular fatty acids. On the basis of phylogenetic analysis, and physiological and biochemical characterization, strain 200 should be classified as representing a novel species of the genus Sphingomonas, for which the name Sphingomonasantarctica sp. nov. is proposed. The type strain is 200 (=CCTCC AB 2016064=KCTC 52488).
菌株200是从中山站附近南极苔原土壤的一份土壤样本中分离得到的,它是革兰氏阴性、黄色素、过氧化氢酶阳性、氧化酶阴性、无运动性、不产芽孢、杆状的需氧细菌。菌株200在pH 7.0且R2A培养基上无氯化钠的条件下生长最佳。其最适生长温度为20°C。基于16S rRNA基因序列的系统发育分析表明,菌株200属于鞘氨醇单胞菌属。菌株200与京畿鞘氨醇单胞菌THG-DT81(95.1%)和软体动物鞘氨醇单胞菌KMM 3882(95.1%)的序列相似性最高。化学分类分析表明,菌株200具有鞘氨醇单胞菌属成员的典型特征。泛醌10是主要的呼吸醌,对称高亚精胺是多胺。主要极性脂类为鞘糖脂、磷脂酰乙醇胺、磷脂酰甘油、二磷脂酰甘油和磷脂酰胆碱。基因组DNA的G+C含量测定为60.9mol%。菌株200含有C16:0(31.6%)、总和特征8(包括C18:1ω7c和/或C18:1ω6c,22.7%)、总和特征3(包括C16:1ω7c和/或C16:1ω6c,11.2%)、C18:0(7.8%)和C14:0 2OH(6.7%)作为主要细胞脂肪酸。基于系统发育分析以及生理生化特征,菌株200应被归类为鞘氨醇单胞菌属的一个新物种,为此提出名称南极鞘氨醇单胞菌(Sphingomonas antarctica sp. nov.)。模式菌株为200(=CCTCC AB 2016064=KCTC 52488)。