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基于宏基因组学的群体感应系统中系统发育多样性研究方法。

Metagenomic approaches to understanding phylogenetic diversity in quorum sensing.

机构信息

Bioproduction Research Institute; National Institute of Advanced Industrial Science and Technology (AIST); Tsukuba, Ibaraki Japan.

出版信息

Virulence. 2014 Apr 1;5(3):433-42. doi: 10.4161/viru.27850. Epub 2014 Feb 11.

Abstract

Quorum sensing, a form of cell-cell communication among bacteria, allows bacteria to synchronize their behaviors at the population level in order to control behaviors such as luminescence, biofilm formation, signal turnover, pigment production, antibiotics production, swarming, and virulence. A better understanding of quorum-sensing systems will provide us with greater insight into the complex interaction mechanisms used widely in the Bacteria and even the Archaea domain in the environment. Metagenomics, the use of culture-independent sequencing to study the genomic material of microorganisms, has the potential to provide direct information about the quorum-sensing systems in uncultured bacteria. This article provides an overview of the current knowledge of quorum sensing focused on phylogenetic diversity, and presents examples of studies that have used metagenomic techniques. Future technologies potentially related to quorum-sensing systems are also discussed.

摘要

群体感应,一种细菌之间的细胞间通讯形式,使细菌能够在群体水平上同步它们的行为,以控制发光、生物膜形成、信号转换、色素产生、抗生素产生、群集和毒力等行为。更好地了解群体感应系统将使我们更深入地了解细菌甚至环境中古菌域中广泛使用的复杂相互作用机制。宏基因组学,即使用非培养测序来研究微生物的基因组物质,有可能提供关于未培养细菌群体感应系统的直接信息。本文概述了目前关于群体感应的知识,重点介绍了系统发育多样性,并介绍了使用宏基因组技术的研究实例。还讨论了未来可能与群体感应系统相关的技术。

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