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波纹鳜(鲈形目:鮨科)的线粒体全基因组序列

The complete mitochondrial genome sequence of Siniperca undulate (Perciformes: Percichthyidae).

作者信息

Tian Changxu, Lv Liyuan, Cai Wenjing, Yuan Yongchao, Liang Xufang, Zhao Cheng, Song Yi, He Yuhui

机构信息

a College of Fishery, Huazhong Agricultural University , Wuhan , China .

b College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University , Wuhan , Hubei , China , and.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):18-9. doi: 10.3109/19401736.2013.867439. Epub 2014 Jan 17.

DOI:10.3109/19401736.2013.867439
PMID:24438293
Abstract

In this paper, the complete mitochondrial DNA (mtDNA) sequence of Siniperca undulate was determined. The complete mtDNA genome sequence of S. undulate was 16,504 bp in length. It consisted of 13 protein-coding genes, 22 transfer RNA genes, 2 rRNA genes and 2 non-coding regions. Overall base composition of mitogenome was estimated to be 28.38% for A, 29.43% for C, 16.46% for G and 25.73% for T, respectively, with a high A + T content (54.11%). The complete mitogenome of the S. undulate can provide a basic data for the studies on population history, molecular systematics, phylogeography, stock evaluation and conservation genetics. It is also helpful to the reasonable utilization and development of rational management strategies for S. undulate resource.

摘要

本文测定了波纹鳜的完整线粒体DNA(mtDNA)序列。波纹鳜的完整线粒体基因组序列长度为16504 bp。它由13个蛋白质编码基因、22个转运RNA基因、2个核糖体RNA基因和2个非编码区组成。线粒体基因组的总体碱基组成估计分别为:A占28.38%,C占29.43%,G占16.46%,T占25.73%,A+T含量较高(54.11%)。波纹鳜的完整线粒体基因组可为种群历史、分子系统学、系统地理学、种群评估和保护遗传学等研究提供基础数据。这也有助于合理利用和制定波纹鳜资源的合理管理策略。

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