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牛胰蛋白酶抑制剂中埋藏水的溶剂交换以及与埋藏水形成氢键的肽NH基团的氢交换。

Solvent exchange of buried water and hydrogen exchange of peptide NH groups hydrogen bonded to buried waters in bovine pancreatic trypsin inhibitor.

作者信息

Tüchsen E, Hayes J M, Ramaprasad S, Copie V, Woodward C

机构信息

Department of Biochemistry, University of Minnesota, St. Paul 55108.

出版信息

Biochemistry. 1987 Aug 11;26(16):5163-72. doi: 10.1021/bi00390a040.

DOI:10.1021/bi00390a040
PMID:2444253
Abstract

Solvent exchange of 18O-labeled buried water in bovine pancreatic trypsin inhibitor (BPTI), trypsin, and trypsin-BPTI complex is measured by high-precision isotope ratio mass spectrometry. Buried water is labeled by equilibration of the protein in 18O-enriched water. Protein samples are then rapidly dialyzed against water of normal isotope composition by gel filtration and stored. The exchangeable 18O label eluting with the protein in 10-300 s is determined by an H2O-CO2 equilibration technique. Exchange of buried waters with solvent water is complete before 10-15 s in BPTI, trypsin, and BPTI-trypsin, as well as in lysozyme and carboxypeptidase measured as controls. When in-exchange dialysis and storage are carried out at pH greater than or equal to 2.5, trypsin-BPTI and trypsin, but not free BPTI, have the equivalent of one 18O atom that exchanges slowly (after 300 s and before several days). This oxygen is probably covalently bound to a specific site in trypsin. When in-exchange dialysis and storage are carried out at pH 1.1, the equivalent of three to seven 18O atoms per molecule is associated with the trypsin-BPTI complex, apparently due to nonspecific covalent 18O labeling of carboxyl groups at low pH. In addition to 18O exchange of buried waters, the hydrogen isotope exchange of buried NH groups H bonded to buried waters was also measured. Their base-catalyzed exchange rate constants are on the order of NH groups that in the crystal are exposed to solvent (static accessibility greater than 0) and hydrogen-bonded main chain O, and their pH min is similar to that for model compounds. The pH dependence of their exchange rate constants suggests that direct exchange with water may significantly contribute to their observed exchange rate.

摘要

通过高精度同位素比质谱法测量牛胰蛋白酶抑制剂(BPTI)、胰蛋白酶和胰蛋白酶 - BPTI复合物中18O标记的埋藏水的溶剂交换。通过在富含18O的水中使蛋白质平衡来标记埋藏水。然后通过凝胶过滤将蛋白质样品快速透析到具有正常同位素组成的水中并储存。通过H2O - CO2平衡技术测定在10 - 300秒内与蛋白质一起洗脱的可交换18O标记。在BPTI、胰蛋白酶和BPTI - 胰蛋白酶中,以及在作为对照测量的溶菌酶和羧肽酶中,埋藏水与溶剂水的交换在10 - 15秒之前完成。当在pH大于或等于2.5的条件下进行交换后透析和储存时,胰蛋白酶 - BPTI和胰蛋白酶,但游离的BPTI没有,有一个18O原子等效物缓慢交换(在300秒后且在数天之前)。这个氧可能共价结合到胰蛋白酶中的一个特定位点。当在pH 1.1的条件下进行交换后透析和储存时,每个分子有三到七个18O原子等效物与胰蛋白酶 - BPTI复合物相关联,显然是由于在低pH下羧基的非特异性共价18O标记。除了埋藏水的18O交换外,还测量了与埋藏水形成氢键的埋藏NH基团的氢同位素交换。它们的碱催化交换速率常数与晶体中暴露于溶剂(静态可及性大于0)并与主链O形成氢键的NH基团的交换速率常数相当,并且它们的pH最小值与模型化合物的相似。它们的交换速率常数对pH的依赖性表明与水的直接交换可能对观察到的交换速率有显著贡献。

相似文献

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Solvent exchange of buried water and hydrogen exchange of peptide NH groups hydrogen bonded to buried waters in bovine pancreatic trypsin inhibitor.牛胰蛋白酶抑制剂中埋藏水的溶剂交换以及与埋藏水形成氢键的肽NH基团的氢交换。
Biochemistry. 1987 Aug 11;26(16):5163-72. doi: 10.1021/bi00390a040.
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Hydrogen kinetics of peptide amide protons at the bovine pancreatic trypsin inhibitor protein-solvent interface.牛胰蛋白酶抑制剂蛋白 - 溶剂界面处肽酰胺质子的氢动力学
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Mechanism of surface peptide proton exchange in bovine pancreatic trypsin inhibitor. Salt effects and O-protonation.牛胰蛋白酶抑制剂中表面肽质子交换的机制。盐效应和O-质子化。
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Hydrogen exchange of primary amide protons in basic pancreatic trypsin inhibitor: evidence for NH2 group rotation in buried asparagine side chains.碱性胰蛋白酶抑制剂中伯酰胺质子的氢交换:埋藏天冬酰胺侧链中NH2基团旋转的证据。
Biochemistry. 1987 Dec 15;26(25):8073-8. doi: 10.1021/bi00399a008.
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Comparison of hydrogen exchange rates for bovine pancreatic trypsin inhibitor in crystals and in solution.晶体状态和溶液状态下牛胰蛋白酶抑制剂氢交换速率的比较。
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Hydrogen exchange kinetics of surface peptide amides in bovine pancreatic trypsin inhibitor.牛胰蛋白酶抑制剂中表面肽酰胺的氢交换动力学
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Hydrogen isotope exchange kinetics of single protons in bovine pancreatic trypsin inhibitor.牛胰蛋白酶抑制剂中单个质子的氢同位素交换动力学
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Residence times of the buried water molecules in bovine pancreatic trypsin inhibitor and its G36S mutant.牛胰蛋白酶抑制剂及其G36S突变体中埋藏水分子的停留时间。
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Binding of native and [homoserine lactone-52]-52,53-seco-bovine basic pancreatic trypsin inhibitor (Kunitz inhibitor) to porcine pancreatic beta-kallikrein-B and bovine alpha-chymotrypsin: thermodynamic study.天然型和[高丝氨酸内酯-52]-52,53-断链牛碱性胰蛋白酶抑制剂(库尼兹抑制剂)与猪胰β-激肽释放酶-B和牛α-胰凝乳蛋白酶的结合:热力学研究
J Mol Recognit. 1994 Mar;7(1):39-46. doi: 10.1002/jmr.300070106.

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