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分析来自单峰驼和双峰驼的常规骆驼抗体的重链和轻链序列。

Analysis of heavy and light chain sequences of conventional camelid antibodies from Camelus dromedarius and Camelus bactrianus species.

机构信息

Department of Structural Biology, UCB, Slough, UK.

Department of Bioinformatics, UCB, Slough, UK.

出版信息

J Immunol Methods. 2014 Mar;405:35-46. doi: 10.1016/j.jim.2014.01.003. Epub 2014 Jan 18.

Abstract

Camel antibodies have been widely investigated, but work has focused upon the unique heavy chain antibodies found across camelid species. These are homodimers, devoid of light chains and the first constant heavy chain domain. Camelid species also display conventional hetero-tetrameric antibodies with identical pairs of heavy and light chains; in Camelus dromedarius these constitute 25% of circulating antibodies. Few investigations have been made on this subset of antibodies and complete conventional camel IgG sequences have not been reported. Here we study the sequence diversity of functional variable and constant regions observed in 57 conventional heavy, 18 kappa and 35 lambda light chains of C. dromedarius and Camelus bactrianus. We detail sequences of the full kappa and lambda light chain, variable and CH1 region for IgG1a and IgG1b and the CH2 and CH3 region for IgG1a. The majority (60%) of IgG1 variable region sequences aligned with the human IgHV3 family (clan III) and had leader sequences beginning with MELG whereas the remaining sequences aligned with the IgHV4 (clan II) and had leader sequences beginning with MRLL. Distinct differences in CDR length were observed between the two; where CDR1 was typically 5 and 7 residues and CDR2 at 17 and 16 residues, respectively. CDR3 length of IgHV4 (range 11 to 20) was closer to that typical of VHH antibodies than that of IgHV3 (range 3 to 18 residues). Designed oligonucleotide primers have enabled identification of paired heavy and light chains of conventional camel antibodies from individual B cell clones.

摘要

骆驼抗体已经得到了广泛的研究,但工作重点主要集中在骆驼科动物中发现的独特重链抗体上。这些抗体是同源二聚体,缺乏轻链和第一个恒定重链结构域。骆驼科动物也表现出常规的异源四聚体抗体,具有相同的重链和轻链对;在单峰驼中,这些抗体占循环抗体的 25%。对这组抗体的研究很少,也没有报道完整的常规骆驼 IgG 序列。在这里,我们研究了 57 个单峰驼和双峰驼常规重链、18 个κ轻链和 35 个λ轻链的功能可变区和恒定区的序列多样性。我们详细描述了 IgG1a 和 IgG1b 的全长κ和λ轻链、可变区和 CH1 区以及 IgG1a 的 CH2 和 CH3 区的序列。大多数(60%)的 IgG1 可变区序列与人类 IgHV3 家族(III 族)对齐,其先导序列以 MELG 开头,而其余序列与 IgHV4(II 族)对齐,其先导序列以 MRLL 开头。这两个家族的 CDR 长度存在明显差异;CDR1 通常为 5 和 7 个残基,CDR2 分别为 17 和 16 个残基。IgHV4 的 CDR3 长度(范围为 11 到 20)与 VHH 抗体的典型长度更接近,而不是 IgHV3(范围为 3 到 18 个残基)。设计的寡核苷酸引物能够从单个 B 细胞克隆中鉴定出常规骆驼抗体的配对重链和轻链。

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