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白蛋白中的各向异性能量流动与别构配体结合

Anisotropic energy flow and allosteric ligand binding in albumin.

作者信息

Li Guifeng, Magana Donny, Dyer R Brian

机构信息

Department of Chemistry, Emory University, 1515 Dickey Dr, Atlanta, Georgia 30322, USA.

出版信息

Nat Commun. 2014;5:3100. doi: 10.1038/ncomms4100.

Abstract

Allosteric interactions in proteins generally involve propagation of local structural changes through the protein to a remote site. Anisotropic energy transport is thought to couple the remote sites, but the nature of this process is poorly understood. Here, we report the relationship between energy flow through the structure of bovine serum albumin and allosteric interactions between remote ligand binding sites of the protein. Ultrafast infrared spectroscopy is used to probe the flow of energy through the protein backbone following excitation of a heater dye, a metalloporphyrin or malachite green, bound to different binding sites in the protein. We observe ballistic and anisotropic energy flow through the protein structure following input of thermal energy into the flexible ligand binding sites, without local heating of the rigid helix bundles that connect these sites. This efficient energy transport mechanism enables the allosteric propagation of binding energy through the connecting helix structures.

摘要

蛋白质中的变构相互作用通常涉及局部结构变化通过蛋白质传播到远处位点。各向异性能量传输被认为将远处位点耦合在一起,但该过程的本质仍知之甚少。在此,我们报告了通过牛血清白蛋白结构的能量流动与该蛋白质远处配体结合位点之间变构相互作用的关系。超快红外光谱用于探测在与蛋白质中不同结合位点结合的加热染料、金属卟啉或孔雀石绿被激发后,能量通过蛋白质主链的流动。我们观察到,在热能输入到柔性配体结合位点后,能量通过蛋白质结构进行弹道式和各向异性流动,而连接这些位点的刚性螺旋束没有局部加热。这种高效的能量传输机制使得结合能通过连接螺旋结构进行变构传播。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0dc4/3949117/2737f1fcf062/nihms558526f1.jpg

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