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DNA条形码技术与北美和西欧丽蝇(双翅目,丽蝇科,金蝇亚科)的区分

DNA barcoding and the differentiation between North American and West European Phormia regina (Diptera, Calliphoridae, Chrysomyinae).

作者信息

Jordaens Kurt, Sonet Gontran, Braet Yves, De Meyer Marc, Backeljau Thierry, Goovaerts Frankie, Bourguignon Luc, Desmyter Stijn

机构信息

Royal Museum for Central Africa, Department of Biology (JEMU), Leuvensesteenweg 13, 3080 Tervuren, Belgium ; University of Antwerp, Evolutionary Ecology Group, Groenenborgerlaan 171, 2020 Antwerp, Belgium.

Royal Belgian Institute of Natural Sciences, OD Taxonomy and Phylogeny (JEMU), Vautierstraat 29, 1000 Brussels, Belgium.

出版信息

Zookeys. 2013 Dec 30(365):149-74. doi: 10.3897/zookeys.365.6202.

DOI:10.3897/zookeys.365.6202
PMID:24453556
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3890676/
Abstract

Phormia regina (the black fly) is a common Holarctic blow fly species which serves as a primary indicator taxon to estimate minimal post mortem intervals. It is also a major research model in physiological and neurological studies on insect feeding. Previous studies have shown a sequence divergence of up to 4.3% in the mitochondrial COI gene between W European and N American P. regina populations. Here, we DNA barcoded P. regina specimens from six N American and 17 W European populations and confirmed a mean sequence divergence of ca. 4% between the populations of the two continents, while sequence divergence within each continent was a ten-fold lower. Comparable mean mtDNA sequence divergences were observed for COII (3.7%) and cyt b (5.3%), but mean divergence was lower for 16S (0.4-0.6%). Intercontinental divergence at nuclear DNA was very low (≤ 0.1% for both 28S and ITS2), and we did not detect any morphological differentiation between N American and W European specimens. Therefore, we consider the strong differentiation at COI, COII and cyt b as intraspecific mtDNA sequence divergence that should be taken into account when using P. regina in forensic casework or experimental research.

摘要

黑花蝇(Phormia regina)是一种常见的全北区丽蝇物种,是用于估计最短死后间隔时间的主要指示分类单元。它也是昆虫进食生理和神经学研究中的主要研究模型。先前的研究表明,西欧和北美黑花蝇种群之间的线粒体COI基因序列差异高达4.3%。在此,我们对来自6个北美种群和17个西欧种群的黑花蝇标本进行了DNA条形码分析,证实两大洲种群之间的平均序列差异约为4%,而每个大洲内部的序列差异则低一个数量级。COII(3.7%)和细胞色素b(5.3%)的线粒体DNA平均序列差异与之相当,但16S的平均差异较低(0.4 - 0.6%)。核DNA的洲际差异非常低(28S和ITS2均≤0.1%),并且我们未检测到北美和西欧标本之间存在任何形态学差异。因此,我们认为COI、COII和细胞色素b的强烈差异是种内线粒体DNA序列差异,在法医案件工作或实验研究中使用黑花蝇时应予以考虑。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/beb1338c53ea/ZooKeys-365-149-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/ddeed86add62/ZooKeys-365-149-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/6df4d61a2cc7/ZooKeys-365-149-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/fcb55853564b/ZooKeys-365-149-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/d8e59e63cd53/ZooKeys-365-149-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/2934527e33a2/ZooKeys-365-149-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/26ba0902f589/ZooKeys-365-149-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/beb1338c53ea/ZooKeys-365-149-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/ddeed86add62/ZooKeys-365-149-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/6df4d61a2cc7/ZooKeys-365-149-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/fcb55853564b/ZooKeys-365-149-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/d8e59e63cd53/ZooKeys-365-149-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/2934527e33a2/ZooKeys-365-149-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/26ba0902f589/ZooKeys-365-149-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50f0/3890676/beb1338c53ea/ZooKeys-365-149-g007.jpg

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