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小鼠一个随机选择的富含CpG的岛上,反向转录本的重合起始位点。

Coincident start sites for divergent transcripts at a randomly selected CpG-rich island of mouse.

作者信息

Lavia P, Macleod D, Bird A

机构信息

MRC Mammalian Genome Unit, Edinburgh, Scotland, UK.

出版信息

EMBO J. 1987 Sep;6(9):2773-9. doi: 10.1002/j.1460-2075.1987.tb02572.x.

DOI:10.1002/j.1460-2075.1987.tb02572.x
PMID:2445562
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC553702/
Abstract

We determined the nucleotide sequence of two HTF islands that were selected at random from mouse chromosomal DNA. Both were non-methylated, G + C rich, and contained CpG at close to the expected frequency. When used as probes, the two islands detected multiple transcripts in RNA from several mouse tissues. Cloned cDNAs for the major transcripts of one island (HTF9) were isolated and used to construct a transcriptional map. We found that HTF9 contains the origin of a pair of divergent transcripts that are probably messenger RNAs. The bidirectional promoter is different from those previously observed as the major transcription start sites for each orientation are coincident on opposite strands of the DNA. The results support the view that HTF islands often mark genes, and they suggest that bidirectional transcription may be a common feature of island promoters.

摘要

我们测定了从小鼠染色体DNA中随机选取的两个HTF岛的核苷酸序列。二者均未甲基化,富含G + C,且所含的CpG频率接近预期。当用作探针时,这两个岛在来自几种小鼠组织的RNA中检测到多个转录本。分离出一个岛(HTF9)主要转录本的克隆cDNA,并用于构建转录图谱。我们发现HTF9包含一对可能是信使RNA的反向转录本的起始位点。双向启动子与先前观察到的不同,因为每个方向的主要转录起始位点在DNA的相反链上是重合的。这些结果支持了HTF岛常常标记基因的观点,并且表明双向转录可能是岛启动子的一个共同特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/5d4170651d3a/emboj00249-0262-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/9d3d61938c99/emboj00249-0261-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/e85f78b875aa/emboj00249-0261-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/5d4170651d3a/emboj00249-0262-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/9d3d61938c99/emboj00249-0261-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/e85f78b875aa/emboj00249-0261-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e8/553702/5d4170651d3a/emboj00249-0262-a.jpg

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本文引用的文献

1
Speculations on RNA splicing.关于RNA剪接的推测。
Cell. 1981 Mar;23(3):643-6. doi: 10.1016/0092-8674(81)90425-6.
2
Unusual methylation pattern of the alpha 2 (l) collagen gene.α2(I)型胶原蛋白基因的异常甲基化模式
Cell. 1982 May;29(1):203-10. doi: 10.1016/0092-8674(82)90104-0.
3
A catalogue of splice junction sequences.剪接连接序列目录。
双向启动子是哺乳动物中基因激活相关非编码 RNA 的主要来源。
BMC Genomics. 2014 Jan 17;15:35. doi: 10.1186/1471-2164-15-35.
4
Role of nucleosomal occupancy in the epigenetic silencing of the MLH1 CpG island.核小体占据在MLH1 CpG岛表观遗传沉默中的作用。
Cancer Cell. 2007 Nov;12(5):432-44. doi: 10.1016/j.ccr.2007.10.014.
5
Ku86 autoantigen related protein-1 transcription initiates from a CpG island and is induced by p53 through a nearby p53 response element.Ku86自身抗原相关蛋白-1转录起始于一个CpG岛,并通过附近的p53反应元件由p53诱导。
Nucleic Acids Res. 2002 Apr 15;30(8):1713-24. doi: 10.1093/nar/30.8.1713.
6
Comparative mapping of the human 22q11 chromosomal region and the orthologous region in mice reveals complex changes in gene organization.人类22号染色体q11区域与小鼠同源区域的比较图谱揭示了基因组织的复杂变化。
Proc Natl Acad Sci U S A. 1997 Dec 23;94(26):14608-13. doi: 10.1073/pnas.94.26.14608.
7
Characterization of multiple alternative RNAs resulting from antisense transcription of the PR264/SC35 splicing factor gene.PR264/SC35剪接因子基因反义转录产生的多种可变RNA的特征分析
Nucleic Acids Res. 1997 Nov 15;25(22):4513-22. doi: 10.1093/nar/25.22.4513.
8
Expression of the murine RanBP1 and Htf9-c genes is regulated from a shared bidirectional promoter during cell cycle progression.在细胞周期进程中,小鼠RanBP1基因和Htf9 - c基因的表达受一个共享的双向启动子调控。
Biochem J. 1997 Jul 1;325 ( Pt 1)(Pt 1):277-86. doi: 10.1042/bj3250277.
9
Cell type-specific interactions of transcription factors with a housekeeping promoter in vivo.转录因子与管家基因启动子在体内的细胞类型特异性相互作用。
Nucleic Acids Res. 1993 May 25;21(10):2465-71. doi: 10.1093/nar/21.10.2465.
10
Coexpression of two closely linked avian genes for purine nucleotide synthesis from a bidirectional promoter.来自双向启动子的两个紧密相连的鸟类嘌呤核苷酸合成基因的共表达。
Mol Cell Biol. 1993 Aug;13(8):4784-92. doi: 10.1128/mcb.13.8.4784-4792.1993.
Nucleic Acids Res. 1982 Jan 22;10(2):459-72. doi: 10.1093/nar/10.2.459.
4
CG dinucleotide clusters in MHC genes and in 5' demethylated genes.MHC基因和5'去甲基化基因中的CG二核苷酸簇。
Nucleic Acids Res. 1984 May 25;12(10):4385-96. doi: 10.1093/nar/12.10.4385.
5
Transcription from SV 40-like monkey DNA sequences.源自猴类SV40样DNA序列的转录。
Nucleic Acids Res. 1984 Jun 11;12(11):4769-88. doi: 10.1093/nar/12.11.4769.
6
"A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.一种将DNA限制性内切酶片段放射性标记至高比活度的技术。附录
Anal Biochem. 1984 Feb;137(1):266-7. doi: 10.1016/0003-2697(84)90381-6.
7
Structure, expression, and mutation of the hypoxanthine phosphoribosyltransferase gene.次黄嘌呤磷酸核糖转移酶基因的结构、表达及突变
Proc Natl Acad Sci U S A. 1984 Apr;81(7):2147-51. doi: 10.1073/pnas.81.7.2147.
8
Pattern of methylation of two genes coding for housekeeping functions.两个编码管家功能的基因的甲基化模式。
Proc Natl Acad Sci U S A. 1983 May;80(9):2422-6. doi: 10.1073/pnas.80.9.2422.
9
Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.用核酸外切酶III进行单向消化可为DNA测序创建靶向断点。
Gene. 1984 Jun;28(3):351-9. doi: 10.1016/0378-1119(84)90153-7.
10
Hybridization of nucleic acids immobilized on solid supports.固定在固体支持物上的核酸杂交。
Anal Biochem. 1984 May 1;138(2):267-84. doi: 10.1016/0003-2697(84)90808-x.